Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC11.84□□□□□ -0.51
CD28P10747 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
CD28P10747 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC11.84□□□□□ -0.51
CD28P10747 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CD28P10747 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC11.84□□□□□ -0.51
CD28P10747 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CD28P10747 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 KRTAP10-13P-201ENST00000412914 571 ntBASIC11.84□□□□□ -0.51
CD28P10747 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.84□□□□□ -0.51
CD28P10747 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC11.84□□□□□ -0.51
CD28P10747 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC11.84□□□□□ -0.51
CD28P10747 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.84□□□□□ -0.51
CD28P10747 COX5BP1-201ENST00000507622 393 ntBASIC11.84□□□□□ -0.51
CD28P10747 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC11.84□□□□□ -0.51
CD28P10747 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
CD28P10747 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC11.84□□□□□ -0.51
CD28P10747 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
CD28P10747 IGHV3OR16-16-201ENST00000563644 343 ntBASIC11.84□□□□□ -0.51
CD28P10747 NAT9-222ENST00000583476 583 ntTSL 3 BASIC11.84□□□□□ -0.51
CD28P10747 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CD28P10747 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
CD28P10747 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC11.84□□□□□ -0.51
CD28P10747 AC084346.2-201ENST00000607097 949 ntBASIC11.84□□□□□ -0.51
CD28P10747 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.84□□□□□ -0.51
CD28P10747 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CD28P10747 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC11.84□□□□□ -0.51
CD28P10747 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
CD28P10747 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC11.84□□□□□ -0.51
CD28P10747 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
CD28P10747 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC11.84□□□□□ -0.51
CD28P10747 HARS-202ENST00000415192 1401 ntTSL 2 BASIC11.84□□□□□ -0.51
CD28P10747 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC11.84□□□□□ -0.51
CD28P10747 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.84□□□□□ -0.51
CD28P10747 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CD28P10747 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC11.84□□□□□ -0.51
CD28P10747 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC11.84□□□□□ -0.51
CD28P10747 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CD28P10747 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
CD28P10747 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
CD28P10747 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
CD28P10747 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
CD28P10747 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
CD28P10747 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
CD28P10747 AL023775.1-201ENST00000454907 1746 ntBASIC11.83□□□□□ -0.52
CD28P10747 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CD28P10747 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC11.83□□□□□ -0.52
CD28P10747 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC11.83□□□□□ -0.52
CD28P10747 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
CD28P10747 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC11.83□□□□□ -0.52
CD28P10747 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC11.83□□□□□ -0.52
CD28P10747 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CD28P10747 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC11.83□□□□□ -0.52
CD28P10747 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC11.83□□□□□ -0.52
CD28P10747 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CD28P10747 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.83□□□□□ -0.52
CD28P10747 LSM5-207ENST00000410044 687 ntTSL 3 BASIC11.83□□□□□ -0.52
CD28P10747 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC11.83□□□□□ -0.52
CD28P10747 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC11.83□□□□□ -0.52
CD28P10747 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC11.83□□□□□ -0.52
CD28P10747 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC11.83□□□□□ -0.52
CD28P10747 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 ARTN-209ENST00000479128 471 ntTSL 3 BASIC11.83□□□□□ -0.52
CD28P10747 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC11.83□□□□□ -0.52
CD28P10747 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC11.83□□□□□ -0.52
CD28P10747 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC11.83□□□□□ -0.52
CD28P10747 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 OR10B1P-201ENST00000601666 907 ntBASIC11.83□□□□□ -0.52
CD28P10747 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
CD28P10747 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC11.83□□□□□ -0.52
CD28P10747 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms