Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRNA1P02708 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRNA1P02708 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHRNA1P02708 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 AC008741.2-201ENST00000612792 3115 ntBASIC16.26■□□□□ 0.19
CHRNA1P02708 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 HYMAI-201ENST00000635591 3347 ntBASIC16.26■□□□□ 0.19
CHRNA1P02708 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRNA1P02708 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CHRNA1P02708 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.26■□□□□ 0.19
CHRNA1P02708 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CHRNA1P02708 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CHRNA1P02708 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CHRNA1P02708 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CHRNA1P02708 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.26■□□□□ 0.19
CHRNA1P02708 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.26■□□□□ 0.19
CHRNA1P02708 AL157407.1-201ENST00000435784 904 ntBASIC16.26■□□□□ 0.19
CHRNA1P02708 AC073150.1-201ENST00000450406 1084 ntBASIC16.26■□□□□ 0.19
CHRNA1P02708 AL353637.1-201ENST00000451571 732 ntBASIC16.26■□□□□ 0.19
CHRNA1P02708 CEP164P1-201ENST00000455142 418 ntBASIC16.26■□□□□ 0.19
CHRNA1P02708 GCOM2-201ENST00000509133 1104 ntBASIC16.26■□□□□ 0.19
CHRNA1P02708 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.26■□□□□ 0.19
CHRNA1P02708 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.26■□□□□ 0.19
CHRNA1P02708 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 AC090857.1-201ENST00000527400 390 ntBASIC16.26■□□□□ 0.19
CHRNA1P02708 RTN3P1-201ENST00000536295 711 ntBASIC16.26■□□□□ 0.19
CHRNA1P02708 AC131206.1-201ENST00000538078 1211 ntBASIC16.26■□□□□ 0.19
CHRNA1P02708 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.26■□□□□ 0.19
CHRNA1P02708 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 AC012044.1-201ENST00000603431 297 ntBASIC16.26■□□□□ 0.19
CHRNA1P02708 AL353726.2-201ENST00000623259 884 ntBASIC16.26■□□□□ 0.19
CHRNA1P02708 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 AC013726.1-201ENST00000563747 2285 ntBASIC16.26■□□□□ 0.19
CHRNA1P02708 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CHRNA1P02708 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.25■□□□□ 0.19
CHRNA1P02708 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CHRNA1P02708 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CHRNA1P02708 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.25■□□□□ 0.19
CHRNA1P02708 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.25■□□□□ 0.19
CHRNA1P02708 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
CHRNA1P02708 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.25■□□□□ 0.19
CHRNA1P02708 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.25■□□□□ 0.19
CHRNA1P02708 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CHRNA1P02708 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CHRNA1P02708 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.25■□□□□ 0.19
CHRNA1P02708 AC242376.1-201ENST00000559033 726 ntBASIC16.25■□□□□ 0.19
CHRNA1P02708 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.25■□□□□ 0.19
CHRNA1P02708 MIR5572-201ENST00000583188 137 ntBASIC16.25■□□□□ 0.19
CHRNA1P02708 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.25■□□□□ 0.19
CHRNA1P02708 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CHRNA1P02708 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CHRNA1P02708 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
CHRNA1P02708 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CHRNA1P02708 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.25■□□□□ 0.19
CHRNA1P02708 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.25■□□□□ 0.19
CHRNA1P02708 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.25■□□□□ 0.19
CHRNA1P02708 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.25■□□□□ 0.19
CHRNA1P02708 TMBIM7P-203ENST00000641617 1718 ntBASIC16.25■□□□□ 0.19
CHRNA1P02708 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CHRNA1P02708 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRNA1P02708 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CHRNA1P02708 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CHRNA1P02708 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms