Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.44■□□□□ 0.22
RNF40O75150 RPS2P32-201ENST00000439199 892 ntBASIC16.44■□□□□ 0.22
RNF40O75150 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF40O75150 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RNF40O75150 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF40O75150 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF40O75150 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF40O75150 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF40O75150 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.44■□□□□ 0.22
RNF40O75150 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RNF40O75150 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.44■□□□□ 0.22
RNF40O75150 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF40O75150 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RNF40O75150 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF40O75150 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF40O75150 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF40O75150 BX640514.1-201ENST00000583223 1918 ntBASIC16.44■□□□□ 0.22
RNF40O75150 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF40O75150 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF40O75150 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF40O75150 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF40O75150 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RNF40O75150 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF40O75150 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF40O75150 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF40O75150 PTENP1-202ENST00000532280 3996 ntBASIC16.44■□□□□ 0.22
RNF40O75150 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF40O75150 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF40O75150 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF40O75150 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.43■□□□□ 0.22
RNF40O75150 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
RNF40O75150 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF40O75150 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RNF40O75150 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
RNF40O75150 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
RNF40O75150 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
RNF40O75150 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF40O75150 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF40O75150 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF40O75150 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF40O75150 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
RNF40O75150 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
RNF40O75150 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF40O75150 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF40O75150 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF40O75150 RN7SL718P-201ENST00000581254 303 ntBASIC16.43■□□□□ 0.22
RNF40O75150 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.43■□□□□ 0.22
RNF40O75150 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 AC093726.1-201ENST00000608064 963 ntBASIC16.43■□□□□ 0.22
RNF40O75150 MIR6799-201ENST00000620297 69 ntBASIC16.43■□□□□ 0.22
RNF40O75150 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF40O75150 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RNF40O75150 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF40O75150 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
RNF40O75150 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF40O75150 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF40O75150 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 AC023024.2-201ENST00000623561 1993 ntBASIC16.42■□□□□ 0.22
RNF40O75150 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF40O75150 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF40O75150 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF40O75150 AL359183.1-201ENST00000623796 2132 ntBASIC16.42■□□□□ 0.22
RNF40O75150 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF40O75150 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF40O75150 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF40O75150 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 AC098850.1-201ENST00000419919 790 ntBASIC16.42■□□□□ 0.22
RNF40O75150 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF40O75150 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF40O75150 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF40O75150 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF40O75150 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms