Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.53□□□□□ -0.24
CXCL13O43927 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CXCL13O43927 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
CXCL13O43927 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.53□□□□□ -0.24
CXCL13O43927 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CXCL13O43927 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CXCL13O43927 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CXCL13O43927 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.53□□□□□ -0.24
CXCL13O43927 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CXCL13O43927 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CXCL13O43927 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
CXCL13O43927 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.53□□□□□ -0.24
CXCL13O43927 MIR1202-201ENST00000408529 83 ntBASIC13.53□□□□□ -0.24
CXCL13O43927 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.53□□□□□ -0.24
CXCL13O43927 HLA-V-201ENST00000429037 534 ntBASIC13.53□□□□□ -0.24
CXCL13O43927 AC026954.1-201ENST00000429771 1293 ntBASIC13.53□□□□□ -0.24
CXCL13O43927 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CXCL13O43927 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.53□□□□□ -0.24
CXCL13O43927 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.53□□□□□ -0.24
CXCL13O43927 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CXCL13O43927 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.53□□□□□ -0.24
CXCL13O43927 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.53□□□□□ -0.24
CXCL13O43927 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CXCL13O43927 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CXCL13O43927 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.53□□□□□ -0.24
CXCL13O43927 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.53□□□□□ -0.24
CXCL13O43927 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CXCL13O43927 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.53□□□□□ -0.24
CXCL13O43927 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.53□□□□□ -0.24
CXCL13O43927 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CXCL13O43927 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
CXCL13O43927 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CXCL13O43927 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCL13O43927 ACE3P-201ENST00000423435 1973 ntBASIC13.52□□□□□ -0.24
CXCL13O43927 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.52□□□□□ -0.24
CXCL13O43927 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CXCL13O43927 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
CXCL13O43927 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CXCL13O43927 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CXCL13O43927 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.52□□□□□ -0.24
CXCL13O43927 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
CXCL13O43927 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CXCL13O43927 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CXCL13O43927 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CXCL13O43927 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
CXCL13O43927 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
CXCL13O43927 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CXCL13O43927 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CXCL13O43927 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
CXCL13O43927 AC006001.1-201ENST00000325130 474 ntBASIC13.52□□□□□ -0.25
CXCL13O43927 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.52□□□□□ -0.25
CXCL13O43927 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCL13O43927 AC099336.1-201ENST00000417053 1171 ntBASIC13.52□□□□□ -0.25
CXCL13O43927 POM121L8P-201ENST00000417732 1281 ntBASIC13.52□□□□□ -0.25
CXCL13O43927 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CXCL13O43927 POM121L9P-203ENST00000441984 1285 ntBASIC13.52□□□□□ -0.25
CXCL13O43927 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.52□□□□□ -0.25
CXCL13O43927 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.52□□□□□ -0.25
CXCL13O43927 AC079316.1-201ENST00000548397 411 ntBASIC13.52□□□□□ -0.25
CXCL13O43927 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.52□□□□□ -0.25
CXCL13O43927 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.52□□□□□ -0.25
CXCL13O43927 AC006453.4-201ENST00000636949 1252 ntBASIC13.52□□□□□ -0.25
CXCL13O43927 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CXCL13O43927 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCL13O43927 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCL13O43927 AL354989.2-201ENST00000435838 1540 ntBASIC13.52□□□□□ -0.25
CXCL13O43927 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CXCL13O43927 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CXCL13O43927 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.52□□□□□ -0.25
CXCL13O43927 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCL13O43927 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CXCL13O43927 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCL13O43927 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCL13O43927 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CXCL13O43927 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCL13O43927 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCL13O43927 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms