Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 PHKG1P2-201ENST00000457537 863 ntBASIC14.21□□□□□ -0.13
CLCA1A8K7I4 MEIS3P1-201ENST00000495167 958 ntBASIC14.21□□□□□ -0.13
CLCA1A8K7I4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 AL450472.2-201ENST00000603663 1156 ntBASIC14.21□□□□□ -0.13
CLCA1A8K7I4 LINC01115-203ENST00000606068 577 ntBASIC14.21□□□□□ -0.13
CLCA1A8K7I4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.21□□□□□ -0.13
CLCA1A8K7I4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CLCA1A8K7I4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLCA1A8K7I4 AL928921.2-201ENST00000641325 2442 ntBASIC14.21□□□□□ -0.14
CLCA1A8K7I4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLCA1A8K7I4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLCA1A8K7I4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLCA1A8K7I4 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.21□□□□□ -0.14
CLCA1A8K7I4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLCA1A8K7I4 AC010327.5-201ENST00000586923 3061 ntBASIC14.21□□□□□ -0.14
CLCA1A8K7I4 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.21□□□□□ -0.14
CLCA1A8K7I4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLCA1A8K7I4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLCA1A8K7I4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 TARDBPP1-201ENST00000442013 1203 ntBASIC14.2□□□□□ -0.14
CLCA1A8K7I4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 CHCHD2P3-201ENST00000603038 451 ntBASIC14.2□□□□□ -0.14
CLCA1A8K7I4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 AC007431.3-201ENST00000623221 587 ntBASIC14.2□□□□□ -0.14
CLCA1A8K7I4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCA1A8K7I4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCA1A8K7I4 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLCA1A8K7I4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCA1A8K7I4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCA1A8K7I4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLCA1A8K7I4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLCA1A8K7I4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms