Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC31.27■■■□□ 2.6
PHRF1Q9P1Y6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC31.27■■■□□ 2.6
PHRF1Q9P1Y6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
PHRF1Q9P1Y6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC31.26■■■□□ 2.59
PHRF1Q9P1Y6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PHRF1Q9P1Y6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
PHRF1Q9P1Y6 AC092171.4-201ENST00000609130 632 ntBASIC31.26■■■□□ 2.59
PHRF1Q9P1Y6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PHRF1Q9P1Y6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PHRF1Q9P1Y6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PHRF1Q9P1Y6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
PHRF1Q9P1Y6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
PHRF1Q9P1Y6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
PHRF1Q9P1Y6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC31.25■■■□□ 2.59
PHRF1Q9P1Y6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC31.24■■■□□ 2.59
PHRF1Q9P1Y6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC31.24■■■□□ 2.59
PHRF1Q9P1Y6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC31.24■■■□□ 2.59
PHRF1Q9P1Y6 AL138724.1-201ENST00000606771 1088 ntBASIC31.24■■■□□ 2.59
PHRF1Q9P1Y6 MIR6089-201ENST00000616698 64 ntBASIC31.24■■■□□ 2.59
PHRF1Q9P1Y6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC31.24■■■□□ 2.59
PHRF1Q9P1Y6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC31.24■■■□□ 2.59
PHRF1Q9P1Y6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PHRF1Q9P1Y6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PHRF1Q9P1Y6 AC136469.2-201ENST00000623944 1028 ntBASIC31.24■■■□□ 2.59
PHRF1Q9P1Y6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC31.24■■■□□ 2.59
PHRF1Q9P1Y6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PHRF1Q9P1Y6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PHRF1Q9P1Y6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PHRF1Q9P1Y6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC31.23■■■□□ 2.59
PHRF1Q9P1Y6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC31.23■■■□□ 2.59
PHRF1Q9P1Y6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
PHRF1Q9P1Y6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC31.22■■■□□ 2.59
PHRF1Q9P1Y6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PHRF1Q9P1Y6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC31.22■■■□□ 2.59
PHRF1Q9P1Y6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
PHRF1Q9P1Y6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
PHRF1Q9P1Y6 AC006455.2-201ENST00000429931 906 ntBASIC31.22■■■□□ 2.59
PHRF1Q9P1Y6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC31.22■■■□□ 2.59
PHRF1Q9P1Y6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PHRF1Q9P1Y6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
PHRF1Q9P1Y6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PHRF1Q9P1Y6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
PHRF1Q9P1Y6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC31.21■■■□□ 2.59
PHRF1Q9P1Y6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC31.21■■■□□ 2.59
PHRF1Q9P1Y6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC31.21■■■□□ 2.59
PHRF1Q9P1Y6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PHRF1Q9P1Y6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PHRF1Q9P1Y6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
PHRF1Q9P1Y6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PHRF1Q9P1Y6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
PHRF1Q9P1Y6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC31.2■■■□□ 2.59
PHRF1Q9P1Y6 AC092803.2-201ENST00000564287 1899 ntBASIC31.2■■■□□ 2.59
PHRF1Q9P1Y6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
PHRF1Q9P1Y6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC31.2■■■□□ 2.58
PHRF1Q9P1Y6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC31.2■■■□□ 2.58
PHRF1Q9P1Y6 AC008764.7-201ENST00000593779 1081 ntBASIC31.2■■■□□ 2.58
PHRF1Q9P1Y6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
PHRF1Q9P1Y6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PHRF1Q9P1Y6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC31.19■■■□□ 2.58
PHRF1Q9P1Y6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PHRF1Q9P1Y6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.19■■■□□ 2.58
PHRF1Q9P1Y6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC31.19■■■□□ 2.58
PHRF1Q9P1Y6 IRS3P-201ENST00000223076 1006 ntBASIC31.19■■■□□ 2.58
PHRF1Q9P1Y6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC31.19■■■□□ 2.58
PHRF1Q9P1Y6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC31.19■■■□□ 2.58
PHRF1Q9P1Y6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
PHRF1Q9P1Y6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PHRF1Q9P1Y6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
PHRF1Q9P1Y6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
PHRF1Q9P1Y6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC31.18■■■□□ 2.58
PHRF1Q9P1Y6 AC090192.1-201ENST00000517740 490 ntBASIC31.18■■■□□ 2.58
PHRF1Q9P1Y6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
PHRF1Q9P1Y6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC31.17■■■□□ 2.58
PHRF1Q9P1Y6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PHRF1Q9P1Y6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
PHRF1Q9P1Y6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
PHRF1Q9P1Y6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PHRF1Q9P1Y6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PHRF1Q9P1Y6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
PHRF1Q9P1Y6 AL031602.1-201ENST00000633169 911 ntBASIC31.16■■■□□ 2.58
PHRF1Q9P1Y6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PHRF1Q9P1Y6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PHRF1Q9P1Y6 IKBKGP1-201ENST00000612193 1073 ntBASIC31.16■■■□□ 2.58
PHRF1Q9P1Y6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC31.16■■■□□ 2.58
PHRF1Q9P1Y6 AC009102.2-201ENST00000606772 1639 ntBASIC31.16■■■□□ 2.58
PHRF1Q9P1Y6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
PHRF1Q9P1Y6 REST-206ENST00000612429 1376 ntTSL 5 BASIC31.15■■■□□ 2.58
PHRF1Q9P1Y6 REST-207ENST00000616975 1370 ntTSL 5 BASIC31.15■■■□□ 2.58
PHRF1Q9P1Y6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC31.14■■■□□ 2.58
PHRF1Q9P1Y6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PHRF1Q9P1Y6 KRT18P5-201ENST00000436075 1291 ntBASIC31.14■■■□□ 2.58
PHRF1Q9P1Y6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PHRF1Q9P1Y6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PHRF1Q9P1Y6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC31.13■■■□□ 2.57
PHRF1Q9P1Y6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
PHRF1Q9P1Y6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC31.13■■■□□ 2.57
PHRF1Q9P1Y6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PHRF1Q9P1Y6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC31.13■■■□□ 2.57
PHRF1Q9P1Y6 SP2-202ENST00000613139 908 ntTSL 5 BASIC31.13■■■□□ 2.57
PHRF1Q9P1Y6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms