Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRTM1Q9HBL6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.07■■□□□ 1.12
LRTM1Q9HBL6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LRTM1Q9HBL6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
LRTM1Q9HBL6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRTM1Q9HBL6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.07■■□□□ 1.12
LRTM1Q9HBL6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.07■■□□□ 1.12
LRTM1Q9HBL6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LRTM1Q9HBL6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRTM1Q9HBL6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRTM1Q9HBL6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRTM1Q9HBL6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.07■■□□□ 1.12
LRTM1Q9HBL6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.07■■□□□ 1.12
LRTM1Q9HBL6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LRTM1Q9HBL6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRTM1Q9HBL6 AC068473.5-201ENST00000616428 2072 ntBASIC22.07■■□□□ 1.12
LRTM1Q9HBL6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LRTM1Q9HBL6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.06■■□□□ 1.12
LRTM1Q9HBL6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRTM1Q9HBL6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.06■■□□□ 1.12
LRTM1Q9HBL6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LRTM1Q9HBL6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
LRTM1Q9HBL6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LRTM1Q9HBL6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
LRTM1Q9HBL6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRTM1Q9HBL6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
LRTM1Q9HBL6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.05■■□□□ 1.12
LRTM1Q9HBL6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.05■■□□□ 1.12
LRTM1Q9HBL6 AC012676.1-201ENST00000574705 1949 ntBASIC22.05■■□□□ 1.12
LRTM1Q9HBL6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
LRTM1Q9HBL6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
LRTM1Q9HBL6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.04■■□□□ 1.12
LRTM1Q9HBL6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LRTM1Q9HBL6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRTM1Q9HBL6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRTM1Q9HBL6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRTM1Q9HBL6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LRTM1Q9HBL6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.04■■□□□ 1.12
LRTM1Q9HBL6 ABHD17AP5-201ENST00000580133 923 ntBASIC22.04■■□□□ 1.12
LRTM1Q9HBL6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRTM1Q9HBL6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRTM1Q9HBL6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LRTM1Q9HBL6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRTM1Q9HBL6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.03■■□□□ 1.12
LRTM1Q9HBL6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRTM1Q9HBL6 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.03■■□□□ 1.12
LRTM1Q9HBL6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
LRTM1Q9HBL6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.03■■□□□ 1.12
LRTM1Q9HBL6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRTM1Q9HBL6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LRTM1Q9HBL6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.03■■□□□ 1.12
LRTM1Q9HBL6 AC011551.1-201ENST00000614101 683 ntBASIC22.03■■□□□ 1.12
LRTM1Q9HBL6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
LRTM1Q9HBL6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.03■■□□□ 1.12
LRTM1Q9HBL6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.03■■□□□ 1.12
LRTM1Q9HBL6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.03■■□□□ 1.12
LRTM1Q9HBL6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.03■■□□□ 1.12
LRTM1Q9HBL6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRTM1Q9HBL6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRTM1Q9HBL6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
LRTM1Q9HBL6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRTM1Q9HBL6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRTM1Q9HBL6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.02■■□□□ 1.12
LRTM1Q9HBL6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRTM1Q9HBL6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRTM1Q9HBL6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.02■■□□□ 1.12
LRTM1Q9HBL6 AC139795.1-202ENST00000500444 432 ntBASIC22.02■■□□□ 1.12
LRTM1Q9HBL6 DUX4L18-201ENST00000553347 1267 ntBASIC22.02■■□□□ 1.12
LRTM1Q9HBL6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRTM1Q9HBL6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRTM1Q9HBL6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRTM1Q9HBL6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRTM1Q9HBL6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
LRTM1Q9HBL6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRTM1Q9HBL6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRTM1Q9HBL6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRTM1Q9HBL6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.01■■□□□ 1.11
LRTM1Q9HBL6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRTM1Q9HBL6 NTF6A-201ENST00000591175 560 ntBASIC22.01■■□□□ 1.11
LRTM1Q9HBL6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.01■■□□□ 1.11
LRTM1Q9HBL6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRTM1Q9HBL6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRTM1Q9HBL6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRTM1Q9HBL6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRTM1Q9HBL6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22■■□□□ 1.11
LRTM1Q9HBL6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRTM1Q9HBL6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
LRTM1Q9HBL6 AL022069.1-201ENST00000568025 1636 ntBASIC22■■□□□ 1.11
LRTM1Q9HBL6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRTM1Q9HBL6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRTM1Q9HBL6 AC019171.1-201ENST00000601251 1056 ntBASIC22■■□□□ 1.11
LRTM1Q9HBL6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRTM1Q9HBL6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22■■□□□ 1.11
LRTM1Q9HBL6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.99■■□□□ 1.11
LRTM1Q9HBL6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
LRTM1Q9HBL6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
LRTM1Q9HBL6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRTM1Q9HBL6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRTM1Q9HBL6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
LRTM1Q9HBL6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms