Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MAP1LC3AQ9H492 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MAP1LC3AQ9H492 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MAP1LC3AQ9H492 MIR219A2-201ENST00000608502 1504 ntBASIC16.73■□□□□ 0.27
MAP1LC3AQ9H492 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
MAP1LC3AQ9H492 HLA-L-211ENST00000482052 1765 ntBASIC16.73■□□□□ 0.27
MAP1LC3AQ9H492 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MAP1LC3AQ9H492 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MAP1LC3AQ9H492 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MAP1LC3AQ9H492 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MAP1LC3AQ9H492 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MAP1LC3AQ9H492 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MAP1LC3AQ9H492 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MAP1LC3AQ9H492 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MAP1LC3AQ9H492 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MAP1LC3AQ9H492 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.72■□□□□ 0.27
MAP1LC3AQ9H492 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.72■□□□□ 0.27
MAP1LC3AQ9H492 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MAP1LC3AQ9H492 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MAP1LC3AQ9H492 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MAP1LC3AQ9H492 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MAP1LC3AQ9H492 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MAP1LC3AQ9H492 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MAP1LC3AQ9H492 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MAP1LC3AQ9H492 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
MAP1LC3AQ9H492 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MAP1LC3AQ9H492 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MAP1LC3AQ9H492 LINC00526-201ENST00000581067 1875 ntBASIC16.71■□□□□ 0.27
MAP1LC3AQ9H492 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MAP1LC3AQ9H492 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MAP1LC3AQ9H492 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MAP1LC3AQ9H492 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MAP1LC3AQ9H492 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
MAP1LC3AQ9H492 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MAP1LC3AQ9H492 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.71■□□□□ 0.27
MAP1LC3AQ9H492 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MAP1LC3AQ9H492 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MAP1LC3AQ9H492 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MAP1LC3AQ9H492 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MAP1LC3AQ9H492 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MAP1LC3AQ9H492 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MAP1LC3AQ9H492 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MAP1LC3AQ9H492 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MAP1LC3AQ9H492 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.7■□□□□ 0.26
MAP1LC3AQ9H492 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MAP1LC3AQ9H492 AC008813.1-201ENST00000536597 885 ntBASIC16.7■□□□□ 0.26
MAP1LC3AQ9H492 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.7■□□□□ 0.26
MAP1LC3AQ9H492 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
MAP1LC3AQ9H492 AC137767.1-201ENST00000602918 1920 ntBASIC16.7■□□□□ 0.26
MAP1LC3AQ9H492 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MAP1LC3AQ9H492 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MAP1LC3AQ9H492 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
MAP1LC3AQ9H492 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MAP1LC3AQ9H492 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MAP1LC3AQ9H492 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
MAP1LC3AQ9H492 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC16.69■□□□□ 0.26
MAP1LC3AQ9H492 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MAP1LC3AQ9H492 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MAP1LC3AQ9H492 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.69■□□□□ 0.26
MAP1LC3AQ9H492 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MAP1LC3AQ9H492 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MAP1LC3AQ9H492 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MAP1LC3AQ9H492 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MAP1LC3AQ9H492 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MAP1LC3AQ9H492 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MAP1LC3AQ9H492 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MAP1LC3AQ9H492 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MAP1LC3AQ9H492 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MAP1LC3AQ9H492 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MAP1LC3AQ9H492 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MAP1LC3AQ9H492 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
MAP1LC3AQ9H492 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC16.68■□□□□ 0.26
MAP1LC3AQ9H492 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MAP1LC3AQ9H492 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.68■□□□□ 0.26
MAP1LC3AQ9H492 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.68■□□□□ 0.26
MAP1LC3AQ9H492 AC148477.6-201ENST00000623746 465 ntBASIC16.68■□□□□ 0.26
MAP1LC3AQ9H492 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MAP1LC3AQ9H492 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MAP1LC3AQ9H492 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MAP1LC3AQ9H492 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MAP1LC3AQ9H492 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MAP1LC3AQ9H492 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MAP1LC3AQ9H492 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MAP1LC3AQ9H492 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MAP1LC3AQ9H492 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
MAP1LC3AQ9H492 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MAP1LC3AQ9H492 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MAP1LC3AQ9H492 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MAP1LC3AQ9H492 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MAP1LC3AQ9H492 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC16.67■□□□□ 0.26
MAP1LC3AQ9H492 GUSBP5-202ENST00000510805 1989 ntBASIC16.67■□□□□ 0.26
MAP1LC3AQ9H492 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MAP1LC3AQ9H492 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MAP1LC3AQ9H492 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MAP1LC3AQ9H492 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MAP1LC3AQ9H492 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
MAP1LC3AQ9H492 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
MAP1LC3AQ9H492 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MAP1LC3AQ9H492 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MAP1LC3AQ9H492 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms