Protein–RNA interactions for Protein: Q9BUF7

CRB3, Protein crumbs homolog 3, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRB3Q9BUF7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CRB3Q9BUF7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CRB3Q9BUF7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.58■■□□□ 1.05
CRB3Q9BUF7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CRB3Q9BUF7 MIR4466-201ENST00000606121 54 ntBASIC21.58■■□□□ 1.05
CRB3Q9BUF7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CRB3Q9BUF7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CRB3Q9BUF7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CRB3Q9BUF7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
CRB3Q9BUF7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.58■■□□□ 1.04
CRB3Q9BUF7 AC005703.6-201ENST00000623265 1329 ntBASIC21.57■■□□□ 1.04
CRB3Q9BUF7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CRB3Q9BUF7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CRB3Q9BUF7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.57■■□□□ 1.04
CRB3Q9BUF7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.57■■□□□ 1.04
CRB3Q9BUF7 AL512631.2-201ENST00000604634 923 ntBASIC21.57■■□□□ 1.04
CRB3Q9BUF7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CRB3Q9BUF7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CRB3Q9BUF7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CRB3Q9BUF7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CRB3Q9BUF7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CRB3Q9BUF7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.57■■□□□ 1.04
CRB3Q9BUF7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CRB3Q9BUF7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CRB3Q9BUF7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.56■■□□□ 1.04
CRB3Q9BUF7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CRB3Q9BUF7 AC022211.4-201ENST00000625094 2161 ntBASIC21.56■■□□□ 1.04
CRB3Q9BUF7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.56■■□□□ 1.04
CRB3Q9BUF7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CRB3Q9BUF7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CRB3Q9BUF7 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.56■■□□□ 1.04
CRB3Q9BUF7 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.56■■□□□ 1.04
CRB3Q9BUF7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CRB3Q9BUF7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CRB3Q9BUF7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
CRB3Q9BUF7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CRB3Q9BUF7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.56■■□□□ 1.04
CRB3Q9BUF7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CRB3Q9BUF7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CRB3Q9BUF7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.55■■□□□ 1.04
CRB3Q9BUF7 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.55■■□□□ 1.04
CRB3Q9BUF7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CRB3Q9BUF7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.55■■□□□ 1.04
CRB3Q9BUF7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CRB3Q9BUF7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CRB3Q9BUF7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CRB3Q9BUF7 HLA-L-211ENST00000482052 1765 ntBASIC21.54■■□□□ 1.04
CRB3Q9BUF7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CRB3Q9BUF7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CRB3Q9BUF7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.54■■□□□ 1.04
CRB3Q9BUF7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CRB3Q9BUF7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CRB3Q9BUF7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CRB3Q9BUF7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CRB3Q9BUF7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CRB3Q9BUF7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRB3Q9BUF7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRB3Q9BUF7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRB3Q9BUF7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CRB3Q9BUF7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CRB3Q9BUF7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CRB3Q9BUF7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRB3Q9BUF7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRB3Q9BUF7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRB3Q9BUF7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CRB3Q9BUF7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CRB3Q9BUF7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CRB3Q9BUF7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CRB3Q9BUF7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.52■■□□□ 1.04
CRB3Q9BUF7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.52■■□□□ 1.04
CRB3Q9BUF7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CRB3Q9BUF7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.52■■□□□ 1.04
CRB3Q9BUF7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.52■■□□□ 1.04
CRB3Q9BUF7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CRB3Q9BUF7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CRB3Q9BUF7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CRB3Q9BUF7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.52■■□□□ 1.03
CRB3Q9BUF7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CRB3Q9BUF7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.51■■□□□ 1.03
CRB3Q9BUF7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CRB3Q9BUF7 AC019069.1-201ENST00000610008 1333 ntBASIC21.51■■□□□ 1.03
CRB3Q9BUF7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CRB3Q9BUF7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CRB3Q9BUF7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CRB3Q9BUF7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CRB3Q9BUF7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CRB3Q9BUF7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.5■■□□□ 1.03
CRB3Q9BUF7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.5■■□□□ 1.03
CRB3Q9BUF7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CRB3Q9BUF7 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.5■■□□□ 1.03
CRB3Q9BUF7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CRB3Q9BUF7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CRB3Q9BUF7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CRB3Q9BUF7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.5■■□□□ 1.03
CRB3Q9BUF7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CRB3Q9BUF7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CRB3Q9BUF7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CRB3Q9BUF7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
CRB3Q9BUF7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CRB3Q9BUF7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms