Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.94■■□□□ 1.9
TMEM47Q9BQJ4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.93■■□□□ 1.9
TMEM47Q9BQJ4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
TMEM47Q9BQJ4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.93■■□□□ 1.9
TMEM47Q9BQJ4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.93■■□□□ 1.9
TMEM47Q9BQJ4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.93■■□□□ 1.9
TMEM47Q9BQJ4 MIR3621-201ENST00000580529 85 ntBASIC26.93■■□□□ 1.9
TMEM47Q9BQJ4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TMEM47Q9BQJ4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TMEM47Q9BQJ4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TMEM47Q9BQJ4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
TMEM47Q9BQJ4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
TMEM47Q9BQJ4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
TMEM47Q9BQJ4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TMEM47Q9BQJ4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
TMEM47Q9BQJ4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TMEM47Q9BQJ4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
TMEM47Q9BQJ4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TMEM47Q9BQJ4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
TMEM47Q9BQJ4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TMEM47Q9BQJ4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
TMEM47Q9BQJ4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
TMEM47Q9BQJ4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
TMEM47Q9BQJ4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
TMEM47Q9BQJ4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
TMEM47Q9BQJ4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TMEM47Q9BQJ4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.9■■□□□ 1.9
TMEM47Q9BQJ4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TMEM47Q9BQJ4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.9■■□□□ 1.9
TMEM47Q9BQJ4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
TMEM47Q9BQJ4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.9■■□□□ 1.9
TMEM47Q9BQJ4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
TMEM47Q9BQJ4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TMEM47Q9BQJ4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
TMEM47Q9BQJ4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.89■■□□□ 1.9
TMEM47Q9BQJ4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.89■■□□□ 1.9
TMEM47Q9BQJ4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.89■■□□□ 1.9
TMEM47Q9BQJ4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.89■■□□□ 1.9
TMEM47Q9BQJ4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.89■■□□□ 1.9
TMEM47Q9BQJ4 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.89■■□□□ 1.9
TMEM47Q9BQJ4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.89■■□□□ 1.9
TMEM47Q9BQJ4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.89■■□□□ 1.89
TMEM47Q9BQJ4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
TMEM47Q9BQJ4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
TMEM47Q9BQJ4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.88■■□□□ 1.89
TMEM47Q9BQJ4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
TMEM47Q9BQJ4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.88■■□□□ 1.89
TMEM47Q9BQJ4 AL356740.2-201ENST00000601559 647 ntBASIC26.88■■□□□ 1.89
TMEM47Q9BQJ4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.88■■□□□ 1.89
TMEM47Q9BQJ4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.87■■□□□ 1.89
TMEM47Q9BQJ4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.87■■□□□ 1.89
TMEM47Q9BQJ4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.87■■□□□ 1.89
TMEM47Q9BQJ4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TMEM47Q9BQJ4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TMEM47Q9BQJ4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
TMEM47Q9BQJ4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TMEM47Q9BQJ4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TMEM47Q9BQJ4 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.86■■□□□ 1.89
TMEM47Q9BQJ4 AC131281.2-201ENST00000520478 145 ntBASIC26.86■■□□□ 1.89
TMEM47Q9BQJ4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TMEM47Q9BQJ4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
TMEM47Q9BQJ4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.86■■□□□ 1.89
TMEM47Q9BQJ4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TMEM47Q9BQJ4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TMEM47Q9BQJ4 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.84■■□□□ 1.89
TMEM47Q9BQJ4 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.84■■□□□ 1.89
TMEM47Q9BQJ4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TMEM47Q9BQJ4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TMEM47Q9BQJ4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TMEM47Q9BQJ4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.84■■□□□ 1.89
TMEM47Q9BQJ4 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.84■■□□□ 1.89
TMEM47Q9BQJ4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TMEM47Q9BQJ4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
TMEM47Q9BQJ4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
TMEM47Q9BQJ4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.84■■□□□ 1.89
TMEM47Q9BQJ4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TMEM47Q9BQJ4 AC008406.3-201ENST00000620001 1374 ntBASIC26.84■■□□□ 1.89
TMEM47Q9BQJ4 AL161729.1-201ENST00000604104 1402 ntBASIC26.83■■□□□ 1.89
TMEM47Q9BQJ4 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.83■■□□□ 1.89
TMEM47Q9BQJ4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.83■■□□□ 1.89
TMEM47Q9BQJ4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TMEM47Q9BQJ4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TMEM47Q9BQJ4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.83■■□□□ 1.89
TMEM47Q9BQJ4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.83■■□□□ 1.89
TMEM47Q9BQJ4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TMEM47Q9BQJ4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TMEM47Q9BQJ4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.82■■□□□ 1.88
TMEM47Q9BQJ4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
TMEM47Q9BQJ4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TMEM47Q9BQJ4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.82■■□□□ 1.88
TMEM47Q9BQJ4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.82■■□□□ 1.88
TMEM47Q9BQJ4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TMEM47Q9BQJ4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.81■■□□□ 1.88
TMEM47Q9BQJ4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.81■■□□□ 1.88
TMEM47Q9BQJ4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.81■■□□□ 1.88
TMEM47Q9BQJ4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.81■■□□□ 1.88
TMEM47Q9BQJ4 AL512631.2-201ENST00000604634 923 ntBASIC26.81■■□□□ 1.88
TMEM47Q9BQJ4 AC005703.6-201ENST00000623265 1329 ntBASIC26.81■■□□□ 1.88
TMEM47Q9BQJ4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TMEM47Q9BQJ4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms