Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GAFA1Q96PS6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
GAFA1Q96PS6 AC004448.1-201ENST00000458332 883 ntBASIC19.17■□□□□ 0.66
GAFA1Q96PS6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GAFA1Q96PS6 SNX5-217ENST00000606557 1087 ntBASIC19.17■□□□□ 0.66
GAFA1Q96PS6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GAFA1Q96PS6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAFA1Q96PS6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GAFA1Q96PS6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GAFA1Q96PS6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GAFA1Q96PS6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GAFA1Q96PS6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GAFA1Q96PS6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
GAFA1Q96PS6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
GAFA1Q96PS6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.16■□□□□ 0.66
GAFA1Q96PS6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GAFA1Q96PS6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GAFA1Q96PS6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
GAFA1Q96PS6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GAFA1Q96PS6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.16■□□□□ 0.66
GAFA1Q96PS6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAFA1Q96PS6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAFA1Q96PS6 AC004812.2-201ENST00000611079 2094 ntBASIC19.15■□□□□ 0.66
GAFA1Q96PS6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GAFA1Q96PS6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.15■□□□□ 0.66
GAFA1Q96PS6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GAFA1Q96PS6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.15■□□□□ 0.66
GAFA1Q96PS6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.15■□□□□ 0.66
GAFA1Q96PS6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAFA1Q96PS6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.15■□□□□ 0.66
GAFA1Q96PS6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GAFA1Q96PS6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.15■□□□□ 0.66
GAFA1Q96PS6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
GAFA1Q96PS6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.14■□□□□ 0.66
GAFA1Q96PS6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
GAFA1Q96PS6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GAFA1Q96PS6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
GAFA1Q96PS6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
GAFA1Q96PS6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.14■□□□□ 0.65
GAFA1Q96PS6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GAFA1Q96PS6 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.14■□□□□ 0.65
GAFA1Q96PS6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
GAFA1Q96PS6 AC092028.1-203ENST00000608262 953 ntBASIC19.14■□□□□ 0.65
GAFA1Q96PS6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
GAFA1Q96PS6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GAFA1Q96PS6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GAFA1Q96PS6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
GAFA1Q96PS6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GAFA1Q96PS6 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.13■□□□□ 0.65
GAFA1Q96PS6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.13■□□□□ 0.65
GAFA1Q96PS6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GAFA1Q96PS6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GAFA1Q96PS6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GAFA1Q96PS6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GAFA1Q96PS6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GAFA1Q96PS6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GAFA1Q96PS6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GAFA1Q96PS6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GAFA1Q96PS6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.12■□□□□ 0.65
GAFA1Q96PS6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.12■□□□□ 0.65
GAFA1Q96PS6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.12■□□□□ 0.65
GAFA1Q96PS6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
GAFA1Q96PS6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GAFA1Q96PS6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GAFA1Q96PS6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.11■□□□□ 0.65
GAFA1Q96PS6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.11■□□□□ 0.65
GAFA1Q96PS6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.11■□□□□ 0.65
GAFA1Q96PS6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
GAFA1Q96PS6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
GAFA1Q96PS6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.11■□□□□ 0.65
GAFA1Q96PS6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.11■□□□□ 0.65
GAFA1Q96PS6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GAFA1Q96PS6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
GAFA1Q96PS6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
GAFA1Q96PS6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GAFA1Q96PS6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
GAFA1Q96PS6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GAFA1Q96PS6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GAFA1Q96PS6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GAFA1Q96PS6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GAFA1Q96PS6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GAFA1Q96PS6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GAFA1Q96PS6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
GAFA1Q96PS6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GAFA1Q96PS6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
GAFA1Q96PS6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.1■□□□□ 0.65
GAFA1Q96PS6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.1■□□□□ 0.65
GAFA1Q96PS6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GAFA1Q96PS6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GAFA1Q96PS6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
GAFA1Q96PS6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
GAFA1Q96PS6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
GAFA1Q96PS6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GAFA1Q96PS6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GAFA1Q96PS6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
GAFA1Q96PS6 TSPY9P-201ENST00000440215 945 ntBASIC19.09■□□□□ 0.65
GAFA1Q96PS6 TSPY11P-201ENST00000442607 1045 ntBASIC19.09■□□□□ 0.65
GAFA1Q96PS6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.09■□□□□ 0.65
GAFA1Q96PS6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GAFA1Q96PS6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms