Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPG11Q96JI7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SPG11Q96JI7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SPG11Q96JI7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.67■□□□□ 0.74
SPG11Q96JI7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SPG11Q96JI7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SPG11Q96JI7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SPG11Q96JI7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPG11Q96JI7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SPG11Q96JI7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPG11Q96JI7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPG11Q96JI7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SPG11Q96JI7 AC097639.1-201ENST00000565519 1891 ntBASIC19.66■□□□□ 0.74
SPG11Q96JI7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.66■□□□□ 0.74
SPG11Q96JI7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPG11Q96JI7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SPG11Q96JI7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPG11Q96JI7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPG11Q96JI7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.66■□□□□ 0.74
SPG11Q96JI7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPG11Q96JI7 ERN1-208ENST00000606895 2068 ntBASIC19.66■□□□□ 0.74
SPG11Q96JI7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPG11Q96JI7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SPG11Q96JI7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.65■□□□□ 0.74
SPG11Q96JI7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPG11Q96JI7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPG11Q96JI7 AC096887.2-201ENST00000623443 1957 ntBASIC19.65■□□□□ 0.74
SPG11Q96JI7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPG11Q96JI7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPG11Q96JI7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPG11Q96JI7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SPG11Q96JI7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.74
SPG11Q96JI7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SPG11Q96JI7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPG11Q96JI7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPG11Q96JI7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.64■□□□□ 0.73
SPG11Q96JI7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.64■□□□□ 0.73
SPG11Q96JI7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
SPG11Q96JI7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPG11Q96JI7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPG11Q96JI7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPG11Q96JI7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPG11Q96JI7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPG11Q96JI7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPG11Q96JI7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SPG11Q96JI7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPG11Q96JI7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.63■□□□□ 0.73
SPG11Q96JI7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPG11Q96JI7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.63■□□□□ 0.73
SPG11Q96JI7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.63■□□□□ 0.73
SPG11Q96JI7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.63■□□□□ 0.73
SPG11Q96JI7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPG11Q96JI7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
SPG11Q96JI7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPG11Q96JI7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPG11Q96JI7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SPG11Q96JI7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.62■□□□□ 0.73
SPG11Q96JI7 AC006455.2-201ENST00000429931 906 ntBASIC19.62■□□□□ 0.73
SPG11Q96JI7 YBX1P1-201ENST00000445822 960 ntBASIC19.62■□□□□ 0.73
SPG11Q96JI7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPG11Q96JI7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPG11Q96JI7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.62■□□□□ 0.73
SPG11Q96JI7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPG11Q96JI7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.62■□□□□ 0.73
SPG11Q96JI7 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.62■□□□□ 0.73
SPG11Q96JI7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.62■□□□□ 0.73
SPG11Q96JI7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.62■□□□□ 0.73
SPG11Q96JI7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SPG11Q96JI7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPG11Q96JI7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPG11Q96JI7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPG11Q96JI7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.61■□□□□ 0.73
SPG11Q96JI7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
SPG11Q96JI7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPG11Q96JI7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.61■□□□□ 0.73
SPG11Q96JI7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPG11Q96JI7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.61■□□□□ 0.73
SPG11Q96JI7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.61■□□□□ 0.73
SPG11Q96JI7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.6■□□□□ 0.73
SPG11Q96JI7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.6■□□□□ 0.73
SPG11Q96JI7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.6■□□□□ 0.73
SPG11Q96JI7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SPG11Q96JI7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPG11Q96JI7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.6■□□□□ 0.73
SPG11Q96JI7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.6■□□□□ 0.73
SPG11Q96JI7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SPG11Q96JI7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SPG11Q96JI7 BX842568.3-201ENST00000418104 571 ntBASIC19.6■□□□□ 0.73
SPG11Q96JI7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.6■□□□□ 0.73
SPG11Q96JI7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.6■□□□□ 0.73
SPG11Q96JI7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SPG11Q96JI7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPG11Q96JI7 KRT18P5-201ENST00000436075 1291 ntBASIC19.59■□□□□ 0.73
SPG11Q96JI7 AC136469.2-201ENST00000623944 1028 ntBASIC19.59■□□□□ 0.73
SPG11Q96JI7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPG11Q96JI7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.59■□□□□ 0.73
SPG11Q96JI7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPG11Q96JI7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.59■□□□□ 0.73
SPG11Q96JI7 AC123595.1-201ENST00000440769 1046 ntBASIC19.59■□□□□ 0.73
SPG11Q96JI7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms