Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.35■■□□□ 1.01
CHD6Q8TD26 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD6Q8TD26 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD6Q8TD26 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.35■■□□□ 1.01
CHD6Q8TD26 AC099791.2-201ENST00000605725 427 ntBASIC21.35■■□□□ 1.01
CHD6Q8TD26 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.34■■□□□ 1.01
CHD6Q8TD26 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.34■■□□□ 1.01
CHD6Q8TD26 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.34■■□□□ 1.01
CHD6Q8TD26 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.34■■□□□ 1.01
CHD6Q8TD26 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHD6Q8TD26 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CHD6Q8TD26 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHD6Q8TD26 AC069152.1-201ENST00000438030 544 ntBASIC21.34■■□□□ 1.01
CHD6Q8TD26 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHD6Q8TD26 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.33■■□□□ 1.01
CHD6Q8TD26 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.33■■□□□ 1.01
CHD6Q8TD26 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
CHD6Q8TD26 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CHD6Q8TD26 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.33■■□□□ 1
CHD6Q8TD26 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
CHD6Q8TD26 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CHD6Q8TD26 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.33■■□□□ 1
CHD6Q8TD26 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.33■■□□□ 1
CHD6Q8TD26 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.32■■□□□ 1
CHD6Q8TD26 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
CHD6Q8TD26 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.32■■□□□ 1
CHD6Q8TD26 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.32■■□□□ 1
CHD6Q8TD26 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.32■■□□□ 1
CHD6Q8TD26 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD6Q8TD26 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD6Q8TD26 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD6Q8TD26 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD6Q8TD26 GUSBP6-202ENST00000438529 1198 ntBASIC21.32■■□□□ 1
CHD6Q8TD26 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD6Q8TD26 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.32■■□□□ 1
CHD6Q8TD26 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.32■■□□□ 1
CHD6Q8TD26 MIR6084-201ENST00000622012 110 ntBASIC21.32■■□□□ 1
CHD6Q8TD26 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHD6Q8TD26 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.31■■□□□ 1
CHD6Q8TD26 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CHD6Q8TD26 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CHD6Q8TD26 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHD6Q8TD26 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.31■■□□□ 1
CHD6Q8TD26 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.3■■□□□ 1
CHD6Q8TD26 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.3■■□□□ 1
CHD6Q8TD26 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.3■■□□□ 1
CHD6Q8TD26 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
CHD6Q8TD26 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CHD6Q8TD26 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.29■■□□□ 1
CHD6Q8TD26 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.29■■□□□ 1
CHD6Q8TD26 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.29■■□□□ 1
CHD6Q8TD26 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHD6Q8TD26 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CHD6Q8TD26 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHD6Q8TD26 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CHD6Q8TD26 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.29■■□□□ 1
CHD6Q8TD26 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.29■■□□□ 1
CHD6Q8TD26 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHD6Q8TD26 AC073210.2-201ENST00000430369 194 ntBASIC21.28■■□□□ 1
CHD6Q8TD26 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.28■■□□□ 1
CHD6Q8TD26 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.28■■□□□ 1
CHD6Q8TD26 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHD6Q8TD26 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHD6Q8TD26 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CHD6Q8TD26 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CHD6Q8TD26 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
CHD6Q8TD26 FAM210CP-201ENST00000445714 574 ntBASIC21.27■■□□□ 1
CHD6Q8TD26 RPS2P52-201ENST00000469610 820 ntBASIC21.27■■□□□ 1
CHD6Q8TD26 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.27■■□□□ 1
CHD6Q8TD26 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CHD6Q8TD26 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CHD6Q8TD26 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHD6Q8TD26 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHD6Q8TD26 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHD6Q8TD26 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
CHD6Q8TD26 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.27■□□□□ 0.99
CHD6Q8TD26 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.27■□□□□ 0.99
CHD6Q8TD26 TPRG1LP1-201ENST00000598702 760 ntBASIC21.27■□□□□ 0.99
CHD6Q8TD26 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.26■□□□□ 0.99
CHD6Q8TD26 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD6Q8TD26 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.26■□□□□ 0.99
CHD6Q8TD26 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD6Q8TD26 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.26■□□□□ 0.99
CHD6Q8TD26 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD6Q8TD26 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD6Q8TD26 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD6Q8TD26 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.25■□□□□ 0.99
CHD6Q8TD26 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.25■□□□□ 0.99
CHD6Q8TD26 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.25■□□□□ 0.99
CHD6Q8TD26 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD6Q8TD26 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.25■□□□□ 0.99
CHD6Q8TD26 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.25■□□□□ 0.99
CHD6Q8TD26 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD6Q8TD26 AL596275.1-201ENST00000423464 877 ntBASIC21.25■□□□□ 0.99
CHD6Q8TD26 POU5F1P3-201ENST00000428824 1078 ntBASIC21.25■□□□□ 0.99
CHD6Q8TD26 AP004607.4-201ENST00000530158 1459 ntBASIC21.25■□□□□ 0.99
CHD6Q8TD26 AL138781.1-201ENST00000566567 1274 ntBASIC21.24■□□□□ 0.99
CHD6Q8TD26 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CHD6Q8TD26 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
CHD6Q8TD26 MIR3181-201ENST00000578512 73 ntBASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms