Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
RNF180Q86T96 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RNF180Q86T96 AC099791.1-201ENST00000416440 715 ntBASIC25.77■■□□□ 1.72
RNF180Q86T96 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.77■■□□□ 1.72
RNF180Q86T96 AC131274.2-201ENST00000580697 1507 ntBASIC25.77■■□□□ 1.72
RNF180Q86T96 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RNF180Q86T96 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.76■■□□□ 1.71
RNF180Q86T96 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.76■■□□□ 1.71
RNF180Q86T96 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RNF180Q86T96 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RNF180Q86T96 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RNF180Q86T96 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
RNF180Q86T96 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.75■■□□□ 1.71
RNF180Q86T96 AC009102.2-201ENST00000606772 1639 ntBASIC25.74■■□□□ 1.71
RNF180Q86T96 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.74■■□□□ 1.71
RNF180Q86T96 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RNF180Q86T96 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RNF180Q86T96 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RNF180Q86T96 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
RNF180Q86T96 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
RNF180Q86T96 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.74■■□□□ 1.71
RNF180Q86T96 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.73■■□□□ 1.71
RNF180Q86T96 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RNF180Q86T96 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.73■■□□□ 1.71
RNF180Q86T96 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.73■■□□□ 1.71
RNF180Q86T96 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
RNF180Q86T96 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RNF180Q86T96 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
RNF180Q86T96 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.72■■□□□ 1.71
RNF180Q86T96 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RNF180Q86T96 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
RNF180Q86T96 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RNF180Q86T96 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.72■■□□□ 1.71
RNF180Q86T96 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC25.72■■□□□ 1.71
RNF180Q86T96 AC241377.3-202ENST00000626088 1088 ntBASIC25.72■■□□□ 1.71
RNF180Q86T96 AC241585.3-202ENST00000628937 1088 ntBASIC25.72■■□□□ 1.71
RNF180Q86T96 AC245100.8-202ENST00000629247 1058 ntBASIC25.72■■□□□ 1.71
RNF180Q86T96 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RNF180Q86T96 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.72■■□□□ 1.71
RNF180Q86T96 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RNF180Q86T96 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.71■■□□□ 1.71
RNF180Q86T96 AC136469.2-201ENST00000623944 1028 ntBASIC25.71■■□□□ 1.71
RNF180Q86T96 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
RNF180Q86T96 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RNF180Q86T96 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.71■■□□□ 1.71
RNF180Q86T96 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.71■■□□□ 1.71
RNF180Q86T96 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
RNF180Q86T96 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
RNF180Q86T96 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
RNF180Q86T96 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.7■■□□□ 1.7
RNF180Q86T96 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RNF180Q86T96 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.7■■□□□ 1.7
RNF180Q86T96 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RNF180Q86T96 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RNF180Q86T96 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.69■■□□□ 1.7
RNF180Q86T96 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
RNF180Q86T96 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.68■■□□□ 1.7
RNF180Q86T96 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RNF180Q86T96 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RNF180Q86T96 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.68■■□□□ 1.7
RNF180Q86T96 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RNF180Q86T96 C17orf82-201ENST00000623772 1530 ntBASIC25.68■■□□□ 1.7
RNF180Q86T96 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF180Q86T96 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
RNF180Q86T96 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC25.67■■□□□ 1.7
RNF180Q86T96 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.67■■□□□ 1.7
RNF180Q86T96 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
RNF180Q86T96 AC233992.3-201ENST00000607491 485 ntBASIC25.67■■□□□ 1.7
RNF180Q86T96 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
RNF180Q86T96 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
RNF180Q86T96 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RNF180Q86T96 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF180Q86T96 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RNF180Q86T96 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF180Q86T96 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF180Q86T96 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.66■■□□□ 1.7
RNF180Q86T96 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.66■■□□□ 1.7
RNF180Q86T96 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.66■■□□□ 1.7
RNF180Q86T96 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.66■■□□□ 1.7
RNF180Q86T96 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
RNF180Q86T96 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
RNF180Q86T96 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RNF180Q86T96 AL022069.1-201ENST00000568025 1636 ntBASIC25.65■■□□□ 1.7
RNF180Q86T96 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF180Q86T96 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
RNF180Q86T96 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.65■■□□□ 1.7
RNF180Q86T96 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RNF180Q86T96 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RNF180Q86T96 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
RNF180Q86T96 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
RNF180Q86T96 BX842568.3-201ENST00000418104 571 ntBASIC25.64■■□□□ 1.7
RNF180Q86T96 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.64■■□□□ 1.7
RNF180Q86T96 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RNF180Q86T96 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
RNF180Q86T96 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.63■■□□□ 1.69
RNF180Q86T96 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.63■■□□□ 1.69
RNF180Q86T96 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.63■■□□□ 1.69
RNF180Q86T96 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
RNF180Q86T96 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.63■■□□□ 1.69
RNF180Q86T96 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms