Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC34.88■■■■□ 3.17
CCDC141Q6ZP82 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
CCDC141Q6ZP82 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
CCDC141Q6ZP82 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC34.88■■■■□ 3.17
CCDC141Q6ZP82 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC34.87■■■■□ 3.17
CCDC141Q6ZP82 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC34.87■■■■□ 3.17
CCDC141Q6ZP82 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC34.87■■■■□ 3.17
CCDC141Q6ZP82 SLC6A10P-202ENST00000431994 2058 ntBASIC34.86■■■■□ 3.17
CCDC141Q6ZP82 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC34.86■■■■□ 3.17
CCDC141Q6ZP82 AL121749.1-202ENST00000609313 2153 ntBASIC34.86■■■■□ 3.17
CCDC141Q6ZP82 SYT6-210ENST00000641643 1587 ntBASIC34.86■■■■□ 3.17
CCDC141Q6ZP82 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC34.86■■■■□ 3.17
CCDC141Q6ZP82 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
CCDC141Q6ZP82 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC34.85■■■■□ 3.17
CCDC141Q6ZP82 HYI-206ENST00000372434 1025 ntTSL 5 BASIC34.85■■■■□ 3.17
CCDC141Q6ZP82 AC092171.4-201ENST00000609130 632 ntBASIC34.85■■■■□ 3.17
CCDC141Q6ZP82 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC34.85■■■■□ 3.17
CCDC141Q6ZP82 AC011298.3-201ENST00000615796 283 ntBASIC34.84■■■■□ 3.17
CCDC141Q6ZP82 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC34.84■■■■□ 3.17
CCDC141Q6ZP82 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CCDC141Q6ZP82 MIR5787-201ENST00000611784 55 ntBASIC34.84■■■■□ 3.17
CCDC141Q6ZP82 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC34.84■■■■□ 3.17
CCDC141Q6ZP82 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
CCDC141Q6ZP82 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CCDC141Q6ZP82 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC34.83■■■■□ 3.17
CCDC141Q6ZP82 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CCDC141Q6ZP82 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
CCDC141Q6ZP82 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC34.83■■■■□ 3.17
CCDC141Q6ZP82 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CCDC141Q6ZP82 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC34.83■■■■□ 3.17
CCDC141Q6ZP82 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
CCDC141Q6ZP82 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
CCDC141Q6ZP82 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
CCDC141Q6ZP82 AC027682.1-201ENST00000562846 899 ntBASIC34.82■■■■□ 3.16
CCDC141Q6ZP82 AC009102.2-201ENST00000606772 1639 ntBASIC34.81■■■■□ 3.16
CCDC141Q6ZP82 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC34.81■■■■□ 3.16
CCDC141Q6ZP82 C17orf82-201ENST00000623772 1530 ntBASIC34.81■■■■□ 3.16
CCDC141Q6ZP82 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC34.81■■■■□ 3.16
CCDC141Q6ZP82 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC34.81■■■■□ 3.16
CCDC141Q6ZP82 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC34.8■■■■□ 3.16
CCDC141Q6ZP82 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC34.8■■■■□ 3.16
CCDC141Q6ZP82 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC34.8■■■■□ 3.16
CCDC141Q6ZP82 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC34.8■■■■□ 3.16
CCDC141Q6ZP82 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC34.8■■■■□ 3.16
CCDC141Q6ZP82 AC104564.3-201ENST00000582367 638 ntBASIC34.79■■■■□ 3.16
CCDC141Q6ZP82 MAG-206ENST00000597035 542 ntTSL 4 BASIC34.79■■■■□ 3.16
CCDC141Q6ZP82 AC099791.2-201ENST00000605725 427 ntBASIC34.79■■■■□ 3.16
CCDC141Q6ZP82 AL138724.1-201ENST00000606771 1088 ntBASIC34.79■■■■□ 3.16
CCDC141Q6ZP82 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC34.79■■■■□ 3.16
CCDC141Q6ZP82 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC34.79■■■■□ 3.16
CCDC141Q6ZP82 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
CCDC141Q6ZP82 CA15P2-201ENST00000611168 834 ntBASIC34.78■■■■□ 3.16
CCDC141Q6ZP82 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CCDC141Q6ZP82 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC34.78■■■■□ 3.16
CCDC141Q6ZP82 DUSP8P4-201ENST00000399538 1761 ntBASIC34.78■■■■□ 3.16
CCDC141Q6ZP82 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC34.78■■■■□ 3.16
CCDC141Q6ZP82 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
CCDC141Q6ZP82 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
CCDC141Q6ZP82 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC34.76■■■■□ 3.16
CCDC141Q6ZP82 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
CCDC141Q6ZP82 STOX2-205ENST00000513034 807 ntTSL 3 BASIC34.76■■■■□ 3.15
CCDC141Q6ZP82 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC34.76■■■■□ 3.15
CCDC141Q6ZP82 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
CCDC141Q6ZP82 RASA4CP-201ENST00000424092 1398 ntBASIC34.75■■■■□ 3.15
CCDC141Q6ZP82 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC34.75■■■■□ 3.15
CCDC141Q6ZP82 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC34.75■■■■□ 3.15
CCDC141Q6ZP82 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
CCDC141Q6ZP82 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
CCDC141Q6ZP82 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC34.74■■■■□ 3.15
CCDC141Q6ZP82 AC092666.2-201ENST00000613287 246 ntBASIC34.74■■■■□ 3.15
CCDC141Q6ZP82 MIR6821-201ENST00000617625 74 ntBASIC34.74■■■■□ 3.15
CCDC141Q6ZP82 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
CCDC141Q6ZP82 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
CCDC141Q6ZP82 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
CCDC141Q6ZP82 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC34.73■■■■□ 3.15
CCDC141Q6ZP82 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
CCDC141Q6ZP82 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC34.73■■■■□ 3.15
CCDC141Q6ZP82 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC34.73■■■■□ 3.15
CCDC141Q6ZP82 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC34.73■■■■□ 3.15
CCDC141Q6ZP82 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC34.73■■■■□ 3.15
CCDC141Q6ZP82 RBM38-205ENST00000440234 686 ntTSL 2 BASIC34.72■■■■□ 3.15
CCDC141Q6ZP82 AL022069.1-201ENST00000568025 1636 ntBASIC34.72■■■■□ 3.15
CCDC141Q6ZP82 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CCDC141Q6ZP82 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC34.71■■■■□ 3.15
CCDC141Q6ZP82 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC34.71■■■■□ 3.15
CCDC141Q6ZP82 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC34.71■■■■□ 3.15
CCDC141Q6ZP82 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
CCDC141Q6ZP82 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CCDC141Q6ZP82 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC34.71■■■■□ 3.15
CCDC141Q6ZP82 CD37-213ENST00000598095 1598 ntTSL 2 BASIC34.71■■■■□ 3.15
CCDC141Q6ZP82 ANKRD20A6P-201ENST00000618763 204 ntBASIC34.71■■■■□ 3.15
CCDC141Q6ZP82 AC136469.2-201ENST00000623944 1028 ntBASIC34.71■■■■□ 3.15
CCDC141Q6ZP82 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
CCDC141Q6ZP82 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.15
CCDC141Q6ZP82 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
CCDC141Q6ZP82 AC097381.1-201ENST00000429019 1296 ntBASIC34.7■■■■□ 3.15
CCDC141Q6ZP82 AC006455.2-201ENST00000429931 906 ntBASIC34.7■■■■□ 3.15
CCDC141Q6ZP82 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC34.7■■■■□ 3.15
CCDC141Q6ZP82 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
CCDC141Q6ZP82 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms