Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 ADE3YGR204W 2841 nt5.45□□□□□ -1.54
VPS38Q05919 UBX7YBR273C 1311 nt5.45□□□□□ -1.54
VPS38Q05919 MET7YOR241W 1647 nt5.45□□□□□ -1.54
VPS38Q05919 SLD2YKL108W 1362 nt5.44□□□□□ -1.54
VPS38Q05919 CTS2YDR371W 1536 nt5.44□□□□□ -1.54
VPS38Q05919 YAP1YML007W 1953 nt5.44□□□□□ -1.54
VPS38Q05919 VPS1YKR001C 2115 nt5.44□□□□□ -1.54
VPS38Q05919 AUA1YFL010W-A 285 nt5.44□□□□□ -1.54
VPS38Q05919 OSW5YMR148W 447 nt5.44□□□□□ -1.54
VPS38Q05919 ADD37YMR184W 597 nt5.44□□□□□ -1.54
VPS38Q05919 FRE7YOL152W 1863 nt5.44□□□□□ -1.54
VPS38Q05919 MTF2YDL044C 1323 nt5.44□□□□□ -1.54
VPS38Q05919 SLO1YER180C-A 258 nt5.43□□□□□ -1.54
VPS38Q05919 YFR052C-AYFR052C-A 306 nt5.43□□□□□ -1.54
VPS38Q05919 RPT6YGL048C 1218 nt5.43□□□□□ -1.54
VPS38Q05919 FUN19YAL034C 1242 nt5.43□□□□□ -1.54
VPS38Q05919 YLR118CYLR118C 684 nt5.43□□□□□ -1.54
VPS38Q05919 MDY2YOL111C 639 nt5.43□□□□□ -1.54
VPS38Q05919 ASP1YDR321W 1146 nt5.42□□□□□ -1.54
VPS38Q05919 YDR417CYDR417C 372 nt5.42□□□□□ -1.54
VPS38Q05919 THI5YFL058W 1023 nt5.42□□□□□ -1.54
VPS38Q05919 TRX2YGR209C 315 nt5.42□□□□□ -1.54
VPS38Q05919 YKL151CYKL151C 1014 nt5.42□□□□□ -1.54
VPS38Q05919 THI12YNL332W 1023 nt5.42□□□□□ -1.54
VPS38Q05919 snR17bsnR17b 332 nt5.42□□□□□ -1.54
VPS38Q05919 PHO90YJL198W 2646 nt5.41□□□□□ -1.54
VPS38Q05919 AAD6YFL056C 639 nt5.41□□□□□ -1.54
VPS38Q05919 SYF2YGR129W 648 nt5.41□□□□□ -1.54
VPS38Q05919 MRPL13YKR006C 795 nt5.41□□□□□ -1.54
VPS38Q05919 YML057C-AYML057C-A 390 nt5.41□□□□□ -1.54
VPS38Q05919 TLG2YOL018C 1194 nt5.41□□□□□ -1.54
VPS38Q05919 CDC28YBR160W 897 nt5.41□□□□□ -1.54
VPS38Q05919 CDC4YFL009W 2340 nt5.41□□□□□ -1.54
VPS38Q05919 THI21YPL258C 1656 nt5.4□□□□□ -1.54
VPS38Q05919 YJL206CYJL206C 2277 nt5.4□□□□□ -1.54
VPS38Q05919 PRO3YER023W 861 nt5.4□□□□□ -1.54
VPS38Q05919 SFK1YKL051W 1062 nt5.4□□□□□ -1.54
VPS38Q05919 PDR16YNL231C 1056 nt5.4□□□□□ -1.54
VPS38Q05919 ZPS1YOL154W 750 nt5.4□□□□□ -1.54
VPS38Q05919 YOR318CYOR318C 306 nt5.4□□□□□ -1.54
VPS38Q05919 LAP2YNL045W 2016 nt5.4□□□□□ -1.55
VPS38Q05919 SOL1YNR034W 966 nt5.39□□□□□ -1.55
VPS38Q05919 LCB2YDR062W 1686 nt5.39□□□□□ -1.55
VPS38Q05919 GCN20YFR009W 2259 nt5.39□□□□□ -1.55
VPS38Q05919 TPS3YMR261C 3165 nt5.38□□□□□ -1.55
VPS38Q05919 YER147C-AYER147C-A 411 nt5.38□□□□□ -1.55
VPS38Q05919 MAC1YMR021C 1254 nt5.38□□□□□ -1.55
VPS38Q05919 CLD1YGR110W 1338 nt5.38□□□□□ -1.55
VPS38Q05919 SPC97YHR172W 2472 nt5.38□□□□□ -1.55
VPS38Q05919 MRE11YMR224C 2079 nt5.37□□□□□ -1.55
VPS38Q05919 RPL12AYEL054C 498 nt5.37□□□□□ -1.55
VPS38Q05919 YEL067CYEL067C 588 nt5.37□□□□□ -1.55
VPS38Q05919 MTC2YKL098W 1074 nt5.37□□□□□ -1.55
VPS38Q05919 YCL012CYCL012C 405 nt5.37□□□□□ -1.55
VPS38Q05919 NOB1YOR056C 1380 nt5.37□□□□□ -1.55
VPS38Q05919 FHL1YPR104C 2811 nt5.37□□□□□ -1.55
VPS38Q05919 GET3YDL100C 1065 nt5.36□□□□□ -1.55
VPS38Q05919 MMS2YGL087C 414 nt5.36□□□□□ -1.55
VPS38Q05919 CTR2YHR175W 570 nt5.36□□□□□ -1.55
VPS38Q05919 TRS33YOR115C 807 nt5.36□□□□□ -1.55
VPS38Q05919 DSE3YOR264W 1293 nt5.36□□□□□ -1.55
VPS38Q05919 YPL014WYPL014W 1146 nt5.36□□□□□ -1.55
VPS38Q05919 YPL062WYPL062W 405 nt5.36□□□□□ -1.55
VPS38Q05919 NDC1YML031W 1968 nt5.36□□□□□ -1.55
VPS38Q05919 GDB1YPR184W 4611 nt5.36□□□□□ -1.55
VPS38Q05919 AXL2YIL140W 2472 nt5.35□□□□□ -1.55
VPS38Q05919 ATR1YML116W 1629 nt5.35□□□□□ -1.55
VPS38Q05919 BUD22YMR014W 1560 nt5.35□□□□□ -1.55
VPS38Q05919 SFT2YBL102W 648 nt5.35□□□□□ -1.55
VPS38Q05919 YOR200WYOR200W 399 nt5.35□□□□□ -1.55
VPS38Q05919 NAT5YOR253W 531 nt5.35□□□□□ -1.55
VPS38Q05919 ATG32YIL146C 1590 nt5.34□□□□□ -1.55
VPS38Q05919 APE1YKL103C 1545 nt5.34□□□□□ -1.55
VPS38Q05919 RKM4YDR257C 1485 nt5.34□□□□□ -1.55
VPS38Q05919 EMP46YLR080W 1335 nt5.34□□□□□ -1.55
VPS38Q05919 RHB1YCR027C 630 nt5.34□□□□□ -1.55
VPS38Q05919 IMG2YCR071C 441 nt5.34□□□□□ -1.55
VPS38Q05919 YGR035W-AYGR035W-A 222 nt5.34□□□□□ -1.55
VPS38Q05919 NSG1YHR133C 876 nt5.34□□□□□ -1.55
VPS38Q05919 DBP8YHR169W 1296 nt5.34□□□□□ -1.55
VPS38Q05919 TOM40YMR203W 1164 nt5.34□□□□□ -1.55
VPS38Q05919 NRM1YNR009W 750 nt5.34□□□□□ -1.55
VPS38Q05919 JEM1YJL073W 1938 nt5.34□□□□□ -1.55
VPS38Q05919 GIP2YER054C 1647 nt5.34□□□□□ -1.56
VPS38Q05919 SPO77YLR341W 1434 nt5.33□□□□□ -1.56
VPS38Q05919 ARP2YDL029W 1176 nt5.33□□□□□ -1.56
VPS38Q05919 YDL172CYDL172C 480 nt5.33□□□□□ -1.56
VPS38Q05919 SYN8YAL014C 768 nt5.33□□□□□ -1.56
VPS38Q05919 MIM2YLR099W-A 264 nt5.33□□□□□ -1.56
VPS38Q05919 MID2YLR332W 1131 nt5.33□□□□□ -1.56
VPS38Q05919 YMR030W-AYMR030W-A 291 nt5.33□□□□□ -1.56
VPS38Q05919 CSL4YNL232W 879 nt5.33□□□□□ -1.56
VPS38Q05919 SAM4YPL273W 978 nt5.33□□□□□ -1.56
VPS38Q05919 PRT1YOR361C 2292 nt5.33□□□□□ -1.56
VPS38Q05919 BRL1YHR036W 1416 nt5.32□□□□□ -1.56
VPS38Q05919 HXT4YHR092C 1731 nt5.32□□□□□ -1.56
VPS38Q05919 ASA1YPR085C 1332 nt5.32□□□□□ -1.56
VPS38Q05919 MNT2YGL257C 1677 nt5.32□□□□□ -1.56
VPS38Q05919 YEL028WYEL028W 462 nt5.32□□□□□ -1.56
VPS38Q05919 PHO86YJL117W 936 nt5.32□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 24.5 ms