Protein–RNA interactions for Protein: P47099

TY1A-JR2, Transposon Ty1-JR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-JR2P47099 LGE1YPL055C 999 nt7.3□□□□□ -1.24
TY1A-JR2P47099 snR44snR44 211 nt7.3□□□□□ -1.24
TY1A-JR2P47099 HXT12YIL170W 1374 nt7.3□□□□□ -1.24
TY1A-JR2P47099 FAR10YLR238W 1437 nt7.29□□□□□ -1.24
TY1A-JR2P47099 YDL050CYDL050C 372 nt7.29□□□□□ -1.24
TY1A-JR2P47099 YDR056CYDR056C 618 nt7.29□□□□□ -1.24
TY1A-JR2P47099 SRB7YDR308C 423 nt7.29□□□□□ -1.24
TY1A-JR2P47099 YGR219WYGR219W 342 nt7.29□□□□□ -1.24
TY1A-JR2P47099 SFH5YJL145W 885 nt7.29□□□□□ -1.24
TY1A-JR2P47099 YKL083WYKL083W 615 nt7.29□□□□□ -1.24
TY1A-JR2P47099 EMG1YLR186W 759 nt7.29□□□□□ -1.24
TY1A-JR2P47099 NAT4YMR069W 858 nt7.29□□□□□ -1.24
TY1A-JR2P47099 TYE7YOR344C 876 nt7.29□□□□□ -1.24
TY1A-JR2P47099 PMT7YDR307W 1989 nt7.29□□□□□ -1.24
TY1A-JR2P47099 FRT1YOR324C 1809 nt7.29□□□□□ -1.24
TY1A-JR2P47099 FRA1YLL029W 2250 nt7.29□□□□□ -1.24
TY1A-JR2P47099 ITR1YDR497C 1755 nt7.28□□□□□ -1.24
TY1A-JR2P47099 MRPS35YGR165W 1038 nt7.28□□□□□ -1.24
TY1A-JR2P47099 RPR2YIR015W 435 nt7.28□□□□□ -1.24
TY1A-JR2P47099 FYV7YLR068W 456 nt7.28□□□□□ -1.24
TY1A-JR2P47099 SLM5YCR024C 1479 nt7.28□□□□□ -1.24
TY1A-JR2P47099 ERG13YML126C 1476 nt7.28□□□□□ -1.24
TY1A-JR2P47099 URK1YNR012W 1506 nt7.27□□□□□ -1.25
TY1A-JR2P47099 TYW3YGL050W 822 nt7.27□□□□□ -1.25
TY1A-JR2P47099 YGR079WYGR079W 1113 nt7.27□□□□□ -1.25
TY1A-JR2P47099 YKL071WYKL071W 771 nt7.27□□□□□ -1.25
TY1A-JR2P47099 ERG6YML008C 1152 nt7.27□□□□□ -1.25
TY1A-JR2P47099 YPL077CYPL077C 723 nt7.27□□□□□ -1.25
TY1A-JR2P47099 FDH2YPL275W 711 nt7.27□□□□□ -1.25
TY1A-JR2P47099 KRE29YER038C 1395 nt7.27□□□□□ -1.25
TY1A-JR2P47099 TOP3YLR234W 1971 nt7.26□□□□□ -1.25
TY1A-JR2P47099 PRC1YMR297W 1599 nt7.26□□□□□ -1.25
TY1A-JR2P47099 SPS1YDR523C 1473 nt7.26□□□□□ -1.25
TY1A-JR2P47099 MRPL1YDR116C 858 nt7.26□□□□□ -1.25
TY1A-JR2P47099 Q0092Q0092 141 nt7.26□□□□□ -1.25
TY1A-JR2P47099 YGL242CYGL242C 546 nt7.26□□□□□ -1.25
TY1A-JR2P47099 MMF1YIL051C 438 nt7.26□□□□□ -1.25
TY1A-JR2P47099 YML084WYML084W 309 nt7.26□□□□□ -1.25
TY1A-JR2P47099 DIA4YHR011W 1341 nt7.26□□□□□ -1.25
TY1A-JR2P47099 AVT5YBL089W 1380 nt7.25□□□□□ -1.25
TY1A-JR2P47099 SPT14YPL175W 1359 nt7.25□□□□□ -1.25
TY1A-JR2P47099 YCR022CYCR022C 345 nt7.25□□□□□ -1.25
TY1A-JR2P47099 TIM22YDL217C 624 nt7.25□□□□□ -1.25
TY1A-JR2P47099 RRP8YDR083W 1179 nt7.25□□□□□ -1.25
TY1A-JR2P47099 YDR381C-AYDR381C-A 345 nt7.25□□□□□ -1.25
TY1A-JR2P47099 YEL010WYEL010W 351 nt7.25□□□□□ -1.25
TY1A-JR2P47099 VPS25YJR102C 609 nt7.25□□□□□ -1.25
TY1A-JR2P47099 UTP5YDR398W 1932 nt7.25□□□□□ -1.25
TY1A-JR2P47099 MAD3YJL013C 1548 nt7.24□□□□□ -1.25
TY1A-JR2P47099 MHF2YDL160C-A 243 nt7.24□□□□□ -1.25
TY1A-JR2P47099 YFR018CYFR018C 1092 nt7.24□□□□□ -1.25
TY1A-JR2P47099 MST27YGL051W 705 nt7.24□□□□□ -1.25
TY1A-JR2P47099 GTF1YGR102C 552 nt7.24□□□□□ -1.25
TY1A-JR2P47099 BIG1YHR101C 1008 nt7.24□□□□□ -1.25
TY1A-JR2P47099 MST28YAR033W 705 nt7.24□□□□□ -1.25
TY1A-JR2P47099 COX7YMR256C 183 nt7.24□□□□□ -1.25
TY1A-JR2P47099 ATG34YOL083W 1239 nt7.24□□□□□ -1.25
TY1A-JR2P47099 WRS1YOL097C 1299 nt7.24□□□□□ -1.25
TY1A-JR2P47099 YOR289WYOR289W 756 nt7.24□□□□□ -1.25
TY1A-JR2P47099 ARR3YPR201W 1215 nt7.24□□□□□ -1.25
TY1A-JR2P47099 BUD30YDL151C 582 nt7.23□□□□□ -1.25
TY1A-JR2P47099 COQ4YDR204W 1008 nt7.23□□□□□ -1.25
TY1A-JR2P47099 GPI11YDR302W 660 nt7.23□□□□□ -1.25
TY1A-JR2P47099 TWF1YGR080W 999 nt7.23□□□□□ -1.25
TY1A-JR2P47099 HUA1YGR268C 597 nt7.23□□□□□ -1.25
TY1A-JR2P47099 RNR2YJL026W 1200 nt7.23□□□□□ -1.25
TY1A-JR2P47099 RPS14BYJL191W 417 nt7.23□□□□□ -1.25
TY1A-JR2P47099 VPS24YKL041W 675 nt7.23□□□□□ -1.25
TY1A-JR2P47099 COS3YML132W 1140 nt7.23□□□□□ -1.25
TY1A-JR2P47099 SAM37YMR060C 984 nt7.23□□□□□ -1.25
TY1A-JR2P47099 BUD17YNR027W 954 nt7.23□□□□□ -1.25
TY1A-JR2P47099 YBR012CYBR012C 420 nt7.23□□□□□ -1.25
TY1A-JR2P47099 DGA1YOR245C 1257 nt7.23□□□□□ -1.25
TY1A-JR2P47099 EAF3YPR023C 1206 nt7.23□□□□□ -1.25
TY1A-JR2P47099 MSI1YBR195C 1269 nt7.23□□□□□ -1.25
TY1A-JR2P47099 COS2YBR302C 1140 nt7.23□□□□□ -1.25
TY1A-JR2P47099 RPT2YDL007W 1314 nt7.23□□□□□ -1.25
TY1A-JR2P47099 AIM17YHL021C 1398 nt7.22□□□□□ -1.25
TY1A-JR2P47099 KIN28YDL108W 921 nt7.22□□□□□ -1.25
TY1A-JR2P47099 VPS74YDR372C 1038 nt7.22□□□□□ -1.25
TY1A-JR2P47099 KRE9YJL174W 831 nt7.22□□□□□ -1.25
TY1A-JR2P47099 GPM1YKL152C 744 nt7.22□□□□□ -1.25
TY1A-JR2P47099 YML083CYML083C 1257 nt7.22□□□□□ -1.25
TY1A-JR2P47099 MRPL3YMR024W 1173 nt7.22□□□□□ -1.25
TY1A-JR2P47099 MDJ2YNL328C 441 nt7.22□□□□□ -1.25
TY1A-JR2P47099 ABP1YCR088W 1779 nt7.22□□□□□ -1.25
TY1A-JR2P47099 VPS72YDR485C 2388 nt7.22□□□□□ -1.25
TY1A-JR2P47099 SPO1YNL012W 1896 nt7.21□□□□□ -1.25
TY1A-JR2P47099 MKS1YNL076W 1755 nt7.21□□□□□ -1.25
TY1A-JR2P47099 TPI1YDR050C 747 nt7.21□□□□□ -1.26
TY1A-JR2P47099 RIB3YDR487C 627 nt7.21□□□□□ -1.26
TY1A-JR2P47099 RPL24AYGL031C 468 nt7.21□□□□□ -1.26
TY1A-JR2P47099 SNO1YMR095C 675 nt7.21□□□□□ -1.26
TY1A-JR2P47099 NSG2YNL156C 900 nt7.21□□□□□ -1.26
TY1A-JR2P47099 IGO1YNL157W 507 nt7.21□□□□□ -1.26
TY1A-JR2P47099 SWT21YNL187W 1074 nt7.21□□□□□ -1.26
TY1A-JR2P47099 YBL095WYBL095W 813 nt7.21□□□□□ -1.26
TY1A-JR2P47099 SHE3YBR130C 1278 nt7.21□□□□□ -1.26
TY1A-JR2P47099 FCY21YER060W 1587 nt7.2□□□□□ -1.26
TY1A-JR2P47099 THI3YDL080C 1830 nt7.2□□□□□ -1.26
Retrieved 100 of 7,029 protein–RNA pairs in 50 ms