Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 CUS2YNL286W 858 nt4.42□□□□□ -1.7
CDC40P40968 ARG8YOL140W 1272 nt4.42□□□□□ -1.7
CDC40P40968 YNG1YOR064C 660 nt4.42□□□□□ -1.7
CDC40P40968 YBR138CYBR138C 1575 nt4.42□□□□□ -1.7
CDC40P40968 APM2YHL019C 1818 nt4.42□□□□□ -1.7
CDC40P40968 NOC4YPR144C 1659 nt4.41□□□□□ -1.7
CDC40P40968 CDC4YFL009W 2340 nt4.41□□□□□ -1.7
CDC40P40968 PAL1YDR348C 1500 nt4.41□□□□□ -1.7
CDC40P40968 RAD57YDR004W 1383 nt4.41□□□□□ -1.7
CDC40P40968 MAK31YCR020C-A 267 nt4.41□□□□□ -1.7
CDC40P40968 YDR034W-BYDR034W-B 156 nt4.41□□□□□ -1.7
CDC40P40968 YGR016WYGR016W 573 nt4.41□□□□□ -1.7
CDC40P40968 YLR036CYLR036C 612 nt4.41□□□□□ -1.7
CDC40P40968 RNH201YNL072W 924 nt4.41□□□□□ -1.7
CDC40P40968 SOL1YNR034W 966 nt4.41□□□□□ -1.7
CDC40P40968 OPY2YPR075C 1083 nt4.41□□□□□ -1.7
CDC40P40968 APE3YBR286W 1614 nt4.41□□□□□ -1.7
CDC40P40968 SED4YCR067C 3198 nt4.4□□□□□ -1.7
CDC40P40968 YET3YDL072C 612 nt4.4□□□□□ -1.71
CDC40P40968 GCS1YDL226C 1059 nt4.4□□□□□ -1.71
CDC40P40968 INO2YDR123C 915 nt4.4□□□□□ -1.71
CDC40P40968 MRM1YOR201C 1239 nt4.4□□□□□ -1.71
CDC40P40968 RAD24YER173W 1980 nt4.4□□□□□ -1.71
CDC40P40968 ERG4YGL012W 1422 nt4.39□□□□□ -1.71
CDC40P40968 YDL183CYDL183C 963 nt4.39□□□□□ -1.71
CDC40P40968 UBC1YDR177W 648 nt4.39□□□□□ -1.71
CDC40P40968 COS4YFL062W 1140 nt4.39□□□□□ -1.71
CDC40P40968 GTO1YGR154C 1071 nt4.39□□□□□ -1.71
CDC40P40968 SFK1YKL051W 1062 nt4.39□□□□□ -1.71
CDC40P40968 YLR122CYLR122C 378 nt4.39□□□□□ -1.71
CDC40P40968 YML101C-AYML101C-A 318 nt4.39□□□□□ -1.71
CDC40P40968 COS3YML132W 1140 nt4.39□□□□□ -1.71
CDC40P40968 NAT5YOR253W 531 nt4.39□□□□□ -1.71
CDC40P40968 COS2YBR302C 1140 nt4.39□□□□□ -1.71
CDC40P40968 MCH4YOL119C 1506 nt4.39□□□□□ -1.71
CDC40P40968 HRK1YOR267C 2280 nt4.39□□□□□ -1.71
CDC40P40968 MSE1YOL033W 1611 nt4.39□□□□□ -1.71
CDC40P40968 CAB3YKL088W 1716 nt4.38□□□□□ -1.71
CDC40P40968 THI22YPR121W 1719 nt4.38□□□□□ -1.71
CDC40P40968 YTA6YPL074W 2265 nt4.38□□□□□ -1.71
CDC40P40968 YEL075W-AYEL075W-A 612 nt4.38□□□□□ -1.71
CDC40P40968 YFR035CYFR035C 345 nt4.38□□□□□ -1.71
CDC40P40968 SKI8YGL213C 1194 nt4.38□□□□□ -1.71
CDC40P40968 NVJ1YHR195W 966 nt4.38□□□□□ -1.71
CDC40P40968 YLR463CYLR463C 552 nt4.38□□□□□ -1.71
CDC40P40968 PDR10YOR328W 4695 nt4.38□□□□□ -1.71
CDC40P40968 FRS1YLR060W 1788 nt4.37□□□□□ -1.71
CDC40P40968 SAC1YKL212W 1872 nt4.37□□□□□ -1.71
CDC40P40968 KTR7YIL085C 1554 nt4.37□□□□□ -1.71
CDC40P40968 SPR28YDR218C 1272 nt4.37□□□□□ -1.71
CDC40P40968 HVG1YER039C 750 nt4.37□□□□□ -1.71
CDC40P40968 SPO12YHR152W 522 nt4.37□□□□□ -1.71
CDC40P40968 MND2YIR025W 1107 nt4.37□□□□□ -1.71
CDC40P40968 YJR115WYJR115W 510 nt4.37□□□□□ -1.71
CDC40P40968 IMD1YAR073W 1212 nt4.37□□□□□ -1.71
CDC40P40968 YML018CYML018C 1182 nt4.37□□□□□ -1.71
CDC40P40968 CAF40YNL288W 1122 nt4.37□□□□□ -1.71
CDC40P40968 DCI1YOR180C 816 nt4.37□□□□□ -1.71
CDC40P40968 YPL102CYPL102C 303 nt4.37□□□□□ -1.71
CDC40P40968 ARR1YPR199C 885 nt4.37□□□□□ -1.71
CDC40P40968 ORC6YHR118C 1308 nt4.37□□□□□ -1.71
CDC40P40968 STL1YDR536W 1710 nt4.37□□□□□ -1.71
CDC40P40968 MMT2YPL224C 1455 nt4.37□□□□□ -1.71
CDC40P40968 MMP1YLL061W 1752 nt4.36□□□□□ -1.71
CDC40P40968 ARC1YGL105W 1131 nt4.36□□□□□ -1.71
CDC40P40968 PGU1YJR153W 1086 nt4.36□□□□□ -1.71
CDC40P40968 MRPL4YLR439W 960 nt4.36□□□□□ -1.71
CDC40P40968 YNL097W-AYNL097W-A 156 nt4.36□□□□□ -1.71
CDC40P40968 YPL073CYPL073C 486 nt4.36□□□□□ -1.71
CDC40P40968 GLT1YDL171C 6438 nt4.36□□□□□ -1.71
CDC40P40968 GAS4YOL132W 1416 nt4.36□□□□□ -1.71
CDC40P40968 STE7YDL159W 1548 nt4.36□□□□□ -1.71
CDC40P40968 SFI1YLL003W 2841 nt4.36□□□□□ -1.71
CDC40P40968 AIM10YER087W 1731 nt4.35□□□□□ -1.71
CDC40P40968 TPS3YMR261C 3165 nt4.35□□□□□ -1.71
CDC40P40968 SKM1YOL113W 1968 nt4.35□□□□□ -1.71
CDC40P40968 YDR015CYDR015C 240 nt4.35□□□□□ -1.71
CDC40P40968 YER010CYER010C 705 nt4.35□□□□□ -1.71
CDC40P40968 FMP33YJL161W 543 nt4.35□□□□□ -1.71
CDC40P40968 CWC25YNL245C 540 nt4.35□□□□□ -1.71
CDC40P40968 PMT4YJR143C 2289 nt4.35□□□□□ -1.71
CDC40P40968 CDC48YDL126C 2508 nt4.35□□□□□ -1.71
CDC40P40968 MOT2YER068W 1764 nt4.35□□□□□ -1.71
CDC40P40968 BDP1YNL039W 1785 nt4.35□□□□□ -1.71
CDC40P40968 TYW1YPL207W 2433 nt4.34□□□□□ -1.71
CDC40P40968 MCM2YBL023C 2607 nt4.34□□□□□ -1.71
CDC40P40968 YGR269WYGR269W 327 nt4.34□□□□□ -1.71
CDC40P40968 LNP1YHR192W 837 nt4.34□□□□□ -1.71
CDC40P40968 YHR214WYHR214W 612 nt4.34□□□□□ -1.71
CDC40P40968 YJL107CYJL107C 1164 nt4.34□□□□□ -1.71
CDC40P40968 YAR066WYAR066W 612 nt4.34□□□□□ -1.71
CDC40P40968 YNL285WYNL285W 372 nt4.34□□□□□ -1.71
CDC40P40968 RPS15YOL040C 429 nt4.34□□□□□ -1.71
CDC40P40968 HAP1YLR256W 4509 nt4.34□□□□□ -1.71
CDC40P40968 QDR1YIL120W 1692 nt4.34□□□□□ -1.71
CDC40P40968 TDA7YNL176C 1911 nt4.34□□□□□ -1.71
CDC40P40968 YDR444WYDR444W 2064 nt4.33□□□□□ -1.72
CDC40P40968 IKS1YJL057C 2004 nt4.33□□□□□ -1.72
CDC40P40968 CAF4YKR036C 1932 nt4.33□□□□□ -1.72
CDC40P40968 GAS5YOL030W 1455 nt4.33□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms