Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC29.8■■■□□ 2.36
PTCD1O75127 SYT6-210ENST00000641643 1587 ntBASIC29.8■■■□□ 2.36
PTCD1O75127 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
PTCD1O75127 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC29.79■■■□□ 2.36
PTCD1O75127 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
PTCD1O75127 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
PTCD1O75127 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
PTCD1O75127 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC29.79■■■□□ 2.36
PTCD1O75127 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
PTCD1O75127 MIR4767-201ENST00000582827 78 ntBASIC29.78■■■□□ 2.36
PTCD1O75127 SF1-220ENST00000626028 704 ntTSL 2 BASIC29.78■■■□□ 2.36
PTCD1O75127 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
PTCD1O75127 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
PTCD1O75127 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
PTCD1O75127 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC29.77■■■□□ 2.36
PTCD1O75127 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
PTCD1O75127 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
PTCD1O75127 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC29.77■■■□□ 2.36
PTCD1O75127 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
PTCD1O75127 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
PTCD1O75127 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
PTCD1O75127 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
PTCD1O75127 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC29.77■■■□□ 2.36
PTCD1O75127 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
PTCD1O75127 AC099791.2-201ENST00000605725 427 ntBASIC29.76■■■□□ 2.35
PTCD1O75127 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
PTCD1O75127 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
PTCD1O75127 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PTCD1O75127 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
PTCD1O75127 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
PTCD1O75127 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PTCD1O75127 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PTCD1O75127 SERBP1P1-201ENST00000396021 1160 ntBASIC29.75■■■□□ 2.35
PTCD1O75127 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
PTCD1O75127 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC29.74■■■□□ 2.35
PTCD1O75127 MAG-206ENST00000597035 542 ntTSL 4 BASIC29.74■■■□□ 2.35
PTCD1O75127 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC29.74■■■□□ 2.35
PTCD1O75127 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
PTCD1O75127 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
PTCD1O75127 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
PTCD1O75127 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PTCD1O75127 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PTCD1O75127 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PTCD1O75127 PTMA-205ENST00000410064 814 ntTSL 2 BASIC29.73■■■□□ 2.35
PTCD1O75127 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
PTCD1O75127 MIR5787-201ENST00000611784 55 ntBASIC29.73■■■□□ 2.35
PTCD1O75127 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
PTCD1O75127 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PTCD1O75127 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PTCD1O75127 RBM38-205ENST00000440234 686 ntTSL 2 BASIC29.72■■■□□ 2.35
PTCD1O75127 AC091305.1-201ENST00000479476 895 ntBASIC29.72■■■□□ 2.35
PTCD1O75127 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC29.72■■■□□ 2.35
PTCD1O75127 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
PTCD1O75127 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC29.72■■■□□ 2.35
PTCD1O75127 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC29.72■■■□□ 2.35
PTCD1O75127 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
PTCD1O75127 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC29.71■■■□□ 2.35
PTCD1O75127 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC29.71■■■□□ 2.35
PTCD1O75127 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
PTCD1O75127 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
PTCD1O75127 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC29.7■■■□□ 2.35
PTCD1O75127 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
PTCD1O75127 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC29.7■■■□□ 2.35
PTCD1O75127 AC092171.4-201ENST00000609130 632 ntBASIC29.7■■■□□ 2.35
PTCD1O75127 AC009102.2-201ENST00000606772 1639 ntBASIC29.7■■■□□ 2.34
PTCD1O75127 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29.7■■■□□ 2.34
PTCD1O75127 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
PTCD1O75127 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
PTCD1O75127 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PTCD1O75127 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC29.69■■■□□ 2.34
PTCD1O75127 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC29.69■■■□□ 2.34
PTCD1O75127 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PTCD1O75127 STK32C-205ENST00000456004 607 ntTSL 2 BASIC29.69■■■□□ 2.34
PTCD1O75127 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC29.69■■■□□ 2.34
PTCD1O75127 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PTCD1O75127 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
PTCD1O75127 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
PTCD1O75127 PTCHD3P2-201ENST00000424937 1205 ntBASIC29.68■■■□□ 2.34
PTCD1O75127 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
PTCD1O75127 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PTCD1O75127 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC29.68■■■□□ 2.34
PTCD1O75127 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
PTCD1O75127 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PTCD1O75127 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
PTCD1O75127 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC29.67■■■□□ 2.34
PTCD1O75127 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
PTCD1O75127 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC29.67■■■□□ 2.34
PTCD1O75127 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC29.66■■■□□ 2.34
PTCD1O75127 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC29.66■■■□□ 2.34
PTCD1O75127 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC29.66■■■□□ 2.34
PTCD1O75127 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC29.66■■■□□ 2.34
PTCD1O75127 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC29.66■■■□□ 2.34
PTCD1O75127 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
PTCD1O75127 CA15P2-201ENST00000611168 834 ntBASIC29.66■■■□□ 2.34
PTCD1O75127 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
PTCD1O75127 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC29.66■■■□□ 2.34
PTCD1O75127 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PTCD1O75127 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC29.66■■■□□ 2.34
PTCD1O75127 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
PTCD1O75127 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC29.65■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms