Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
LCMT2O60294 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.05■■□□□ 1.12
LCMT2O60294 MIR4787-201ENST00000607364 84 ntBASIC22.05■■□□□ 1.12
LCMT2O60294 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LCMT2O60294 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LCMT2O60294 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LCMT2O60294 KRT125P-201ENST00000546827 989 ntBASIC22.04■■□□□ 1.12
LCMT2O60294 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LCMT2O60294 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
LCMT2O60294 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LCMT2O60294 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.03■■□□□ 1.12
LCMT2O60294 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.03■■□□□ 1.12
LCMT2O60294 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.03■■□□□ 1.12
LCMT2O60294 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LCMT2O60294 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.03■■□□□ 1.12
LCMT2O60294 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LCMT2O60294 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.03■■□□□ 1.12
LCMT2O60294 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LCMT2O60294 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.03■■□□□ 1.12
LCMT2O60294 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.03■■□□□ 1.12
LCMT2O60294 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LCMT2O60294 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LCMT2O60294 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LCMT2O60294 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
LCMT2O60294 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LCMT2O60294 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.01■■□□□ 1.11
LCMT2O60294 AC004448.1-201ENST00000458332 883 ntBASIC22.01■■□□□ 1.11
LCMT2O60294 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.01■■□□□ 1.11
LCMT2O60294 SNX5-217ENST00000606557 1087 ntBASIC22.01■■□□□ 1.11
LCMT2O60294 AC092028.1-203ENST00000608262 953 ntBASIC22.01■■□□□ 1.11
LCMT2O60294 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LCMT2O60294 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
LCMT2O60294 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22■■□□□ 1.11
LCMT2O60294 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LCMT2O60294 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
LCMT2O60294 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LCMT2O60294 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22■■□□□ 1.11
LCMT2O60294 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22■■□□□ 1.11
LCMT2O60294 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22■■□□□ 1.11
LCMT2O60294 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LCMT2O60294 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LCMT2O60294 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LCMT2O60294 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LCMT2O60294 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.99■■□□□ 1.11
LCMT2O60294 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.99■■□□□ 1.11
LCMT2O60294 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LCMT2O60294 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LCMT2O60294 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.99■■□□□ 1.11
LCMT2O60294 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.99■■□□□ 1.11
LCMT2O60294 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
LCMT2O60294 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LCMT2O60294 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LCMT2O60294 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LCMT2O60294 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LCMT2O60294 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LCMT2O60294 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LCMT2O60294 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LCMT2O60294 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.98■■□□□ 1.11
LCMT2O60294 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.98■■□□□ 1.11
LCMT2O60294 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LCMT2O60294 AL161729.1-201ENST00000604104 1402 ntBASIC21.97■■□□□ 1.11
LCMT2O60294 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LCMT2O60294 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
LCMT2O60294 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LCMT2O60294 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LCMT2O60294 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.97■■□□□ 1.11
LCMT2O60294 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.97■■□□□ 1.11
LCMT2O60294 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.97■■□□□ 1.11
LCMT2O60294 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LCMT2O60294 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LCMT2O60294 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.97■■□□□ 1.11
LCMT2O60294 ABCB10P4-201ENST00000566803 2184 ntBASIC21.97■■□□□ 1.11
LCMT2O60294 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LCMT2O60294 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.96■■□□□ 1.11
LCMT2O60294 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
LCMT2O60294 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LCMT2O60294 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LCMT2O60294 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
LCMT2O60294 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.96■■□□□ 1.11
LCMT2O60294 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LCMT2O60294 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.95■■□□□ 1.11
LCMT2O60294 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
LCMT2O60294 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
LCMT2O60294 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCMT2O60294 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCMT2O60294 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
LCMT2O60294 GUSBP5-201ENST00000418136 578 ntBASIC21.95■■□□□ 1.1
LCMT2O60294 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LCMT2O60294 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
LCMT2O60294 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.95■■□□□ 1.1
LCMT2O60294 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCMT2O60294 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.95■■□□□ 1.1
LCMT2O60294 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LCMT2O60294 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCMT2O60294 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LCMT2O60294 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.94■■□□□ 1.1
LCMT2O60294 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LCMT2O60294 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LCMT2O60294 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LCMT2O60294 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms