Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 C1QBPP1-201ENST00000400117 770 ntBASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 PFN1P12-201ENST00000455938 534 ntBASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 CLUHP6-201ENST00000580789 941 ntBASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 MIR3615-201ENST00000581999 87 ntBASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 AC010328.2-201ENST00000597698 1111 ntBASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 AC244669.2-201ENST00000612320 853 ntBASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 FGD5P1-202ENST00000614866 2498 ntBASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB1Q9Y5F3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 LILRP1-201ENST00000444199 1370 ntBASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 GOLGA2P4-201ENST00000441462 777 ntBASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 YBX1P6-201ENST00000442962 1002 ntBASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 AC106760.1-201ENST00000508690 800 ntBASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 BX539320.1-201ENST00000623759 877 ntBASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 AL158070.2-201ENST00000623713 1621 ntBASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 AC099063.4-201ENST00000641099 1602 ntBASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 AP002414.2-201ENST00000591780 3365 ntBASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHB1Q9Y5F3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHB1Q9Y5F3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms