Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 AC010422.6-201ENST00000593682 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 ZNF549-201ENST00000240719 3969 ntAPPRIS P3 TSL 2 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 SORBS3-201ENST00000240123 3459 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 TIAM2-201ENST00000275246 2491 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 CDHR4-202ENST00000412678 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 AC018892.3-201ENST00000623986 2499 ntBASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 GPR158-201ENST00000376351 6959 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDC42SE1Q9NRR8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 MVK-214ENST00000629016 1591 ntTSL 5 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 DBH-202ENST00000393056 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 PELO-201ENST00000274311 4349 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 CFAP43-204ENST00000369720 2876 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 CIZ1-225ENST00000538431 2996 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 MCAM-201ENST00000264036 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 KCNB1-201ENST00000371741 11879 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 FOSB-210ENST00000591858 3658 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 CAPN10-AS1-201ENST00000567819 4000 ntBASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 MYH4-201ENST00000255381 6016 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 PDGFD-201ENST00000302251 4052 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 KLF6-207ENST00000542957 4537 ntTSL 5 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 AK3-203ENST00000447596 705 ntTSL 2 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 MAX-217ENST00000557277 728 ntTSL 3 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 AL591742.1-201ENST00000604433 565 ntBASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 AL121906.2-201ENST00000621597 723 ntBASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 AL035685.1-201ENST00000636663 812 ntBASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 SNX29-205ENST00000566228 8171 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 RBM20-201ENST00000369519 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 AC131888.1-201ENST00000625028 2168 ntBASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 F2-205ENST00000530231 1849 ntTSL 5 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 ATP2A1-201ENST00000357084 3532 ntTSL 2 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 CLINT1-206ENST00000523094 3987 ntTSL 2 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 FCRL2-201ENST00000361516 2579 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDC42SE1Q9NRR8 PEG10-203ENST00000488574 2587 ntTSL 2 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms