Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AL928921.2-201ENST00000641325 2442 ntBASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 AC010327.5-201ENST00000586923 3061 ntBASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RTN4IP1Q8WWV3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 MIR943-201ENST00000401286 94 ntBASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 TREML5P-201ENST00000421694 576 ntBASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 TARDBPP1-201ENST00000442013 1203 ntBASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 RN7SL618P-201ENST00000477850 296 ntBASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.8□□□□□ -0.36
RTN4IP1Q8WWV3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms