Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.43■□□□□ 0.38
USP50Q70EL3 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP50Q70EL3 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC17.43■□□□□ 0.38
USP50Q70EL3 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC17.43■□□□□ 0.38
USP50Q70EL3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
USP50Q70EL3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP50Q70EL3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USP50Q70EL3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USP50Q70EL3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP50Q70EL3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USP50Q70EL3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP50Q70EL3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP50Q70EL3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP50Q70EL3 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP50Q70EL3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP50Q70EL3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP50Q70EL3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.42■□□□□ 0.38
USP50Q70EL3 AL672207.1-201ENST00000328462 1570 ntBASIC17.42■□□□□ 0.38
USP50Q70EL3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP50Q70EL3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP50Q70EL3 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
USP50Q70EL3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
USP50Q70EL3 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC17.42■□□□□ 0.38
USP50Q70EL3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.42■□□□□ 0.38
USP50Q70EL3 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP50Q70EL3 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC17.42■□□□□ 0.38
USP50Q70EL3 RN7SL23P-201ENST00000484055 275 ntBASIC17.42■□□□□ 0.38
USP50Q70EL3 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP50Q70EL3 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC17.42■□□□□ 0.38
USP50Q70EL3 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC17.42■□□□□ 0.38
USP50Q70EL3 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP50Q70EL3 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC17.42■□□□□ 0.38
USP50Q70EL3 THY1-209ENST00000580275 578 ntTSL 3 BASIC17.42■□□□□ 0.38
USP50Q70EL3 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC17.42■□□□□ 0.38
USP50Q70EL3 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
USP50Q70EL3 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
USP50Q70EL3 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
USP50Q70EL3 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
USP50Q70EL3 REXO1L2P-201ENST00000425429 2069 ntBASIC17.42■□□□□ 0.38
USP50Q70EL3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP50Q70EL3 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
USP50Q70EL3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP50Q70EL3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USP50Q70EL3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP50Q70EL3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP50Q70EL3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.42■□□□□ 0.38
USP50Q70EL3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.42■□□□□ 0.38
USP50Q70EL3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
USP50Q70EL3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.42■□□□□ 0.38
USP50Q70EL3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP50Q70EL3 API5-208ENST00000531273 1868 ntTSL 2 BASIC17.41■□□□□ 0.38
USP50Q70EL3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
USP50Q70EL3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.41■□□□□ 0.38
USP50Q70EL3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP50Q70EL3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.41■□□□□ 0.38
USP50Q70EL3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP50Q70EL3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP50Q70EL3 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP50Q70EL3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP50Q70EL3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP50Q70EL3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
USP50Q70EL3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.41■□□□□ 0.38
USP50Q70EL3 AL603832.2-201ENST00000566195 2125 ntBASIC17.41■□□□□ 0.38
USP50Q70EL3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP50Q70EL3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP50Q70EL3 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
USP50Q70EL3 AL357373.1-201ENST00000394974 322 ntBASIC17.41■□□□□ 0.38
USP50Q70EL3 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC17.41■□□□□ 0.38
USP50Q70EL3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.41■□□□□ 0.38
USP50Q70EL3 AC226150.1-201ENST00000544259 466 ntBASIC17.41■□□□□ 0.38
USP50Q70EL3 HMGB1P24-201ENST00000611897 328 ntBASIC17.41■□□□□ 0.38
USP50Q70EL3 MIR6746-201ENST00000620971 63 ntBASIC17.41■□□□□ 0.38
USP50Q70EL3 MME-218ENST00000625667 363 ntTSL 5 BASIC17.41■□□□□ 0.38
USP50Q70EL3 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC17.41■□□□□ 0.38
USP50Q70EL3 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC17.41■□□□□ 0.38
USP50Q70EL3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP50Q70EL3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP50Q70EL3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP50Q70EL3 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC17.41■□□□□ 0.38
USP50Q70EL3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP50Q70EL3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
USP50Q70EL3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.41■□□□□ 0.38
USP50Q70EL3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USP50Q70EL3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
USP50Q70EL3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USP50Q70EL3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
USP50Q70EL3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.4■□□□□ 0.38
USP50Q70EL3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
USP50Q70EL3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.4■□□□□ 0.38
USP50Q70EL3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP50Q70EL3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP50Q70EL3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP50Q70EL3 AC026471.1-201ENST00000564629 3026 ntBASIC17.4■□□□□ 0.38
USP50Q70EL3 AC080080.1-201ENST00000625121 2420 ntBASIC17.4■□□□□ 0.38
USP50Q70EL3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
USP50Q70EL3 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP50Q70EL3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP50Q70EL3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP50Q70EL3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP50Q70EL3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms