Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 AC092053.3-201ENST00000641308 4975 ntBASIC11.49□□□□□ -0.57
MRPL54Q6P161 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 AC016397.2-201ENST00000624848 1985 ntBASIC11.48□□□□□ -0.57
MRPL54Q6P161 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 DUX4L26-201ENST00000489078 1255 ntBASIC11.48□□□□□ -0.57
MRPL54Q6P161 PRYP6-201ENST00000514804 343 ntBASIC11.48□□□□□ -0.57
MRPL54Q6P161 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 RIN3-211ENST00000557762 517 ntTSL 3 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 AC012615.1-201ENST00000565797 1299 ntBASIC11.48□□□□□ -0.57
MRPL54Q6P161 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 AC133561.5-201ENST00000635547 218 ntBASIC11.48□□□□□ -0.57
MRPL54Q6P161 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 AL805961.2-201ENST00000642139 4817 ntBASIC11.48□□□□□ -0.57
MRPL54Q6P161 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
MRPL54Q6P161 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.48□□□□□ -0.57
MRPL54Q6P161 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
MRPL54Q6P161 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL54Q6P161 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
MRPL54Q6P161 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
MRPL54Q6P161 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC11.47□□□□□ -0.57
MRPL54Q6P161 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL54Q6P161 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
MRPL54Q6P161 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
MRPL54Q6P161 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL54Q6P161 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.47□□□□□ -0.57
MRPL54Q6P161 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL54Q6P161 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.47□□□□□ -0.57
MRPL54Q6P161 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL54Q6P161 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL54Q6P161 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL54Q6P161 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
MRPL54Q6P161 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL54Q6P161 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL54Q6P161 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.47□□□□□ -0.57
MRPL54Q6P161 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL54Q6P161 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL54Q6P161 KRT8P24-201ENST00000560290 1559 ntBASIC11.47□□□□□ -0.57
MRPL54Q6P161 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL54Q6P161 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.47□□□□□ -0.57
MRPL54Q6P161 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MRPL54Q6P161 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.47□□□□□ -0.57
MRPL54Q6P161 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms