Protein–RNA interactions for Protein: Q00610

CLTC, Clathrin heavy chain 1, humanhuman

Known RBP Predictions only

Length 1,675 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCQ00610 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CLTCQ00610 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLTCQ00610 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLTCQ00610 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC21.24■□□□□ 0.99
CLTCQ00610 AL109809.1-201ENST00000418979 1367 ntBASIC21.24■□□□□ 0.99
CLTCQ00610 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLTCQ00610 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLTCQ00610 HNRNPA1P58-201ENST00000403629 610 ntBASIC21.24■□□□□ 0.99
CLTCQ00610 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC21.24■□□□□ 0.99
CLTCQ00610 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLTCQ00610 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC21.24■□□□□ 0.99
CLTCQ00610 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CLTCQ00610 AP005212.2-201ENST00000584979 510 ntBASIC21.24■□□□□ 0.99
CLTCQ00610 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC21.24■□□□□ 0.99
CLTCQ00610 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC21.24■□□□□ 0.99
CLTCQ00610 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC21.24■□□□□ 0.99
CLTCQ00610 AL133467.4-201ENST00000602953 725 ntBASIC21.24■□□□□ 0.99
CLTCQ00610 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC21.24■□□□□ 0.99
CLTCQ00610 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC21.24■□□□□ 0.99
CLTCQ00610 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
CLTCQ00610 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLTCQ00610 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLTCQ00610 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLTCQ00610 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLTCQ00610 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLTCQ00610 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLTCQ00610 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CLTCQ00610 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLTCQ00610 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLTCQ00610 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLTCQ00610 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLTCQ00610 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC21.23■□□□□ 0.99
CLTCQ00610 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLTCQ00610 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC21.23■□□□□ 0.99
CLTCQ00610 RPS23-207ENST00000511844 530 ntTSL 2 BASIC21.23■□□□□ 0.99
CLTCQ00610 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC21.23■□□□□ 0.99
CLTCQ00610 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC21.23■□□□□ 0.99
CLTCQ00610 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CLTCQ00610 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC21.23■□□□□ 0.99
CLTCQ00610 MT2A-202ENST00000561491 581 ntTSL 2 BASIC21.23■□□□□ 0.99
CLTCQ00610 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC21.23■□□□□ 0.99
CLTCQ00610 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC21.23■□□□□ 0.99
CLTCQ00610 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC21.23■□□□□ 0.99
CLTCQ00610 LINC00244-201ENST00000625073 613 ntBASIC21.23■□□□□ 0.99
CLTCQ00610 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CLTCQ00610 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLTCQ00610 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC21.23■□□□□ 0.99
CLTCQ00610 AC092850.2-201ENST00000623821 2697 ntBASIC21.23■□□□□ 0.99
CLTCQ00610 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLTCQ00610 AP003680.1-201ENST00000598970 3660 ntBASIC21.23■□□□□ 0.99
CLTCQ00610 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLTCQ00610 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLTCQ00610 AC004554.1-201ENST00000422830 1468 ntBASIC21.23■□□□□ 0.99
CLTCQ00610 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC21.23■□□□□ 0.99
CLTCQ00610 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CLTCQ00610 DKFZP434H168-201ENST00000567381 1905 ntBASIC21.23■□□□□ 0.99
CLTCQ00610 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CLTCQ00610 AGGF1P1-201ENST00000509500 2073 ntBASIC21.23■□□□□ 0.99
CLTCQ00610 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLTCQ00610 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLTCQ00610 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLTCQ00610 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC21.22■□□□□ 0.99
CLTCQ00610 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC21.22■□□□□ 0.99
CLTCQ00610 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLTCQ00610 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLTCQ00610 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLTCQ00610 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLTCQ00610 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC21.22■□□□□ 0.99
CLTCQ00610 AL929302.1-201ENST00000426556 871 ntBASIC21.22■□□□□ 0.99
CLTCQ00610 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CLTCQ00610 AC018638.5-201ENST00000450885 754 ntBASIC21.22■□□□□ 0.99
CLTCQ00610 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC21.22■□□□□ 0.99
CLTCQ00610 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLTCQ00610 RN7SL582P-201ENST00000491078 279 ntBASIC21.22■□□□□ 0.99
CLTCQ00610 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC21.22■□□□□ 0.99
CLTCQ00610 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC21.22■□□□□ 0.99
CLTCQ00610 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLTCQ00610 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC21.22■□□□□ 0.99
CLTCQ00610 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLTCQ00610 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC21.22■□□□□ 0.99
CLTCQ00610 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC21.22■□□□□ 0.99
CLTCQ00610 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLTCQ00610 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLTCQ00610 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLTCQ00610 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC21.22■□□□□ 0.99
CLTCQ00610 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC21.22■□□□□ 0.99
CLTCQ00610 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLTCQ00610 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLTCQ00610 AIRN-201ENST00000601203 4374 ntBASIC21.22■□□□□ 0.99
CLTCQ00610 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLTCQ00610 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CLTCQ00610 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC21.21■□□□□ 0.99
CLTCQ00610 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLTCQ00610 MIR1301-201ENST00000408518 82 ntBASIC21.21■□□□□ 0.99
CLTCQ00610 AC004522.1-201ENST00000419978 654 ntBASIC21.21■□□□□ 0.99
CLTCQ00610 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC21.21■□□□□ 0.99
CLTCQ00610 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLTCQ00610 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC21.21■□□□□ 0.99
CLTCQ00610 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC21.21■□□□□ 0.99
CLTCQ00610 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms