Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.04■□□□□ 0.32
TPM4P67936 AL928921.2-201ENST00000641325 2442 ntBASIC17.04■□□□□ 0.32
TPM4P67936 LILRP1-201ENST00000444199 1370 ntBASIC17.03■□□□□ 0.32
TPM4P67936 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TPM4P67936 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
TPM4P67936 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM4P67936 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM4P67936 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM4P67936 AC092053.3-201ENST00000641308 4975 ntBASIC17.03■□□□□ 0.32
TPM4P67936 AL731571.1-201ENST00000617058 5428 ntBASIC17.03■□□□□ 0.32
TPM4P67936 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM4P67936 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TPM4P67936 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TPM4P67936 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM4P67936 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM4P67936 AC023274.1-201ENST00000418278 595 ntBASIC17.03■□□□□ 0.32
TPM4P67936 AC005237.2-201ENST00000434368 219 ntBASIC17.03■□□□□ 0.32
TPM4P67936 TPM4P1-201ENST00000436100 807 ntBASIC17.03■□□□□ 0.32
TPM4P67936 MTND6P24-201ENST00000440466 518 ntBASIC17.03■□□□□ 0.32
TPM4P67936 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.03■□□□□ 0.32
TPM4P67936 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.03■□□□□ 0.32
TPM4P67936 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.03■□□□□ 0.32
TPM4P67936 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.03■□□□□ 0.32
TPM4P67936 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.03■□□□□ 0.32
TPM4P67936 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TPM4P67936 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM4P67936 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.03■□□□□ 0.32
TPM4P67936 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.03■□□□□ 0.32
TPM4P67936 RN7SL828P-201ENST00000607615 303 ntBASIC17.03■□□□□ 0.32
TPM4P67936 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TPM4P67936 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TPM4P67936 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TPM4P67936 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.03■□□□□ 0.32
TPM4P67936 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TPM4P67936 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM4P67936 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM4P67936 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM4P67936 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM4P67936 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.02■□□□□ 0.32
TPM4P67936 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM4P67936 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TPM4P67936 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC17.02■□□□□ 0.32
TPM4P67936 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TPM4P67936 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TPM4P67936 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
TPM4P67936 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TPM4P67936 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM4P67936 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.02■□□□□ 0.32
TPM4P67936 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.02■□□□□ 0.32
TPM4P67936 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM4P67936 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TPM4P67936 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM4P67936 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM4P67936 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.02■□□□□ 0.32
TPM4P67936 AL590627.1-203ENST00000421194 1026 ntBASIC17.02■□□□□ 0.32
TPM4P67936 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.02■□□□□ 0.32
TPM4P67936 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.02■□□□□ 0.32
TPM4P67936 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
TPM4P67936 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.32
TPM4P67936 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TPM4P67936 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.02■□□□□ 0.32
TPM4P67936 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM4P67936 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
TPM4P67936 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
TPM4P67936 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM4P67936 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TPM4P67936 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.02■□□□□ 0.32
TPM4P67936 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TPM4P67936 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TPM4P67936 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TPM4P67936 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TPM4P67936 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TPM4P67936 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TPM4P67936 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TPM4P67936 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TPM4P67936 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TPM4P67936 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
TPM4P67936 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TPM4P67936 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM4P67936 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM4P67936 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM4P67936 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM4P67936 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TPM4P67936 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM4P67936 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM4P67936 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM4P67936 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM4P67936 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM4P67936 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM4P67936 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TPM4P67936 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TPM4P67936 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
TPM4P67936 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM4P67936 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM4P67936 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TPM4P67936 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.01■□□□□ 0.31
TPM4P67936 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.01■□□□□ 0.31
TPM4P67936 KRT18P32-201ENST00000424695 1287 ntBASIC17.01■□□□□ 0.31
TPM4P67936 SERBP1P3-201ENST00000459980 809 ntBASIC17.01■□□□□ 0.31
TPM4P67936 KRT18P43-201ENST00000469825 1281 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms