Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KRT2P35908 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KRT2P35908 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KRT2P35908 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KRT2P35908 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
KRT2P35908 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.33■□□□□ 0.36
KRT2P35908 INE1-201ENST00000456273 945 ntBASIC17.33■□□□□ 0.36
KRT2P35908 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.33■□□□□ 0.36
KRT2P35908 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
KRT2P35908 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
KRT2P35908 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KRT2P35908 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
KRT2P35908 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.33■□□□□ 0.36
KRT2P35908 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
KRT2P35908 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KRT2P35908 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
KRT2P35908 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KRT2P35908 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KRT2P35908 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KRT2P35908 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
KRT2P35908 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.33■□□□□ 0.36
KRT2P35908 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.33■□□□□ 0.36
KRT2P35908 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
KRT2P35908 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
KRT2P35908 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
KRT2P35908 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT2P35908 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT2P35908 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 AC007686.3-201ENST00000619017 3487 ntBASIC17.32■□□□□ 0.36
KRT2P35908 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.32■□□□□ 0.36
KRT2P35908 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT2P35908 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.32■□□□□ 0.36
KRT2P35908 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.32■□□□□ 0.36
KRT2P35908 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT2P35908 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
KRT2P35908 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.32■□□□□ 0.36
KRT2P35908 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.32■□□□□ 0.36
KRT2P35908 AC007389.4-201ENST00000454674 793 ntBASIC17.32■□□□□ 0.36
KRT2P35908 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT2P35908 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.32■□□□□ 0.36
KRT2P35908 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
KRT2P35908 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.32■□□□□ 0.36
KRT2P35908 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 AC007292.2-201ENST00000593524 1812 ntBASIC17.32■□□□□ 0.36
KRT2P35908 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.32■□□□□ 0.36
KRT2P35908 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.32■□□□□ 0.36
KRT2P35908 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
KRT2P35908 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.32■□□□□ 0.36
KRT2P35908 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 AC232323.1-201ENST00000540724 2099 ntBASIC17.32■□□□□ 0.36
KRT2P35908 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT2P35908 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
KRT2P35908 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT2P35908 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT2P35908 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT2P35908 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT2P35908 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT2P35908 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT2P35908 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT2P35908 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
KRT2P35908 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT2P35908 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT2P35908 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT2P35908 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT2P35908 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT2P35908 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT2P35908 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT2P35908 AC145423.3-201ENST00000615987 467 ntBASIC17.31■□□□□ 0.36
KRT2P35908 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT2P35908 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT2P35908 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT2P35908 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT2P35908 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
KRT2P35908 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT2P35908 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
KRT2P35908 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT2P35908 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT2P35908 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT2P35908 AL161772.1-201ENST00000610494 4412 ntBASIC17.31■□□□□ 0.36
KRT2P35908 LINC00552-201ENST00000625151 2579 ntBASIC17.31■□□□□ 0.36
KRT2P35908 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT2P35908 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
KRT2P35908 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms