Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMPD1P17405 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMPD1P17405 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMPD1P17405 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SMPD1P17405 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SMPD1P17405 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMPD1P17405 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMPD1P17405 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
SMPD1P17405 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 AC144522.1-201ENST00000625111 1658 ntBASIC16.62■□□□□ 0.25
SMPD1P17405 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.62■□□□□ 0.25
SMPD1P17405 TBC1D3J-201ENST00000620719 1426 ntBASIC16.62■□□□□ 0.25
SMPD1P17405 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.62■□□□□ 0.25
SMPD1P17405 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 AC126365.1-201ENST00000578585 1514 ntBASIC16.62■□□□□ 0.25
SMPD1P17405 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SMPD1P17405 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.62■□□□□ 0.25
SMPD1P17405 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.62■□□□□ 0.25
SMPD1P17405 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 AC008267.1-201ENST00000474858 1069 ntBASIC16.62■□□□□ 0.25
SMPD1P17405 AC006122.1-201ENST00000493323 440 ntBASIC16.62■□□□□ 0.25
SMPD1P17405 POU5F1P2-201ENST00000521750 823 ntBASIC16.62■□□□□ 0.25
SMPD1P17405 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.62■□□□□ 0.25
SMPD1P17405 RN7SL555P-201ENST00000584742 339 ntBASIC16.62■□□□□ 0.25
SMPD1P17405 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
SMPD1P17405 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
SMPD1P17405 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.62■□□□□ 0.25
SMPD1P17405 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.62■□□□□ 0.25
SMPD1P17405 AC073352.2-201ENST00000609385 439 ntBASIC16.62■□□□□ 0.25
SMPD1P17405 AL157813.1-201ENST00000612996 587 ntBASIC16.62■□□□□ 0.25
SMPD1P17405 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.62■□□□□ 0.25
SMPD1P17405 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.62■□□□□ 0.25
SMPD1P17405 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SMPD1P17405 CYP4F23P-201ENST00000593402 1579 ntBASIC16.62■□□□□ 0.25
SMPD1P17405 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.62■□□□□ 0.25
SMPD1P17405 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.62■□□□□ 0.25
SMPD1P17405 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 ZBED1P1-201ENST00000502364 1930 ntBASIC16.62■□□□□ 0.25
SMPD1P17405 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SMPD1P17405 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMPD1P17405 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SMPD1P17405 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SMPD1P17405 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.61■□□□□ 0.25
SMPD1P17405 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.61■□□□□ 0.25
SMPD1P17405 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.61■□□□□ 0.25
SMPD1P17405 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SMPD1P17405 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SMPD1P17405 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.61■□□□□ 0.25
SMPD1P17405 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 AC026316.1-201ENST00000398900 414 ntBASIC16.61■□□□□ 0.25
SMPD1P17405 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.61■□□□□ 0.25
SMPD1P17405 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.61■□□□□ 0.25
SMPD1P17405 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.61■□□□□ 0.25
SMPD1P17405 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.61■□□□□ 0.25
SMPD1P17405 IQSEC3P1-201ENST00000538799 536 ntBASIC16.61■□□□□ 0.25
SMPD1P17405 AC103691.2-201ENST00000618824 433 ntBASIC16.61■□□□□ 0.25
SMPD1P17405 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SMPD1P17405 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.61■□□□□ 0.25
SMPD1P17405 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.61■□□□□ 0.25
SMPD1P17405 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SMPD1P17405 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMPD1P17405 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.6■□□□□ 0.25
SMPD1P17405 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms