Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RB1P06400 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.84■□□□□ 0.13
RB1P06400 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RB1P06400 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RB1P06400 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.84■□□□□ 0.13
RB1P06400 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RB1P06400 RPL8P2-201ENST00000430538 502 ntBASIC15.84■□□□□ 0.13
RB1P06400 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC15.84■□□□□ 0.13
RB1P06400 CTBP2P4-201ENST00000513884 920 ntBASIC15.84■□□□□ 0.13
RB1P06400 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.84■□□□□ 0.13
RB1P06400 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.84■□□□□ 0.13
RB1P06400 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.84■□□□□ 0.13
RB1P06400 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.84■□□□□ 0.13
RB1P06400 MIR3677-201ENST00000578964 60 ntBASIC15.84■□□□□ 0.13
RB1P06400 MIR4649-201ENST00000582839 64 ntBASIC15.84■□□□□ 0.13
RB1P06400 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.84■□□□□ 0.13
RB1P06400 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.84■□□□□ 0.13
RB1P06400 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.84■□□□□ 0.13
RB1P06400 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.84■□□□□ 0.13
RB1P06400 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.84■□□□□ 0.13
RB1P06400 AC005632.3-201ENST00000605544 308 ntBASIC15.84■□□□□ 0.13
RB1P06400 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.84■□□□□ 0.13
RB1P06400 AC007718.1-201ENST00000621078 280 ntBASIC15.84■□□□□ 0.13
RB1P06400 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RB1P06400 AC092127.1-201ENST00000567093 3455 ntBASIC15.84■□□□□ 0.13
RB1P06400 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RB1P06400 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RB1P06400 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.84■□□□□ 0.13
RB1P06400 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RB1P06400 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RB1P06400 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RB1P06400 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RB1P06400 CAP2P1-201ENST00000557743 1390 ntBASIC15.84■□□□□ 0.13
RB1P06400 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
RB1P06400 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RB1P06400 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RB1P06400 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.84■□□□□ 0.13
RB1P06400 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RB1P06400 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RB1P06400 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
RB1P06400 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RB1P06400 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.83■□□□□ 0.13
RB1P06400 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
RB1P06400 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RB1P06400 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.83■□□□□ 0.13
RB1P06400 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
RB1P06400 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RB1P06400 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RB1P06400 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RB1P06400 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RB1P06400 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RB1P06400 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.83■□□□□ 0.12
RB1P06400 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.83■□□□□ 0.12
RB1P06400 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
RB1P06400 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.83■□□□□ 0.12
RB1P06400 AC009084.3-201ENST00000623356 437 ntBASIC15.83■□□□□ 0.12
RB1P06400 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RB1P06400 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RB1P06400 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.83■□□□□ 0.12
RB1P06400 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RB1P06400 AL513523.2-202ENST00000427283 2040 ntBASIC15.83■□□□□ 0.12
RB1P06400 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RB1P06400 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.83■□□□□ 0.12
RB1P06400 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RB1P06400 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RB1P06400 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.83■□□□□ 0.12
RB1P06400 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RB1P06400 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.83■□□□□ 0.12
RB1P06400 AC144522.1-201ENST00000625111 1658 ntBASIC15.83■□□□□ 0.12
RB1P06400 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RB1P06400 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.82■□□□□ 0.12
RB1P06400 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.82■□□□□ 0.12
RB1P06400 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RB1P06400 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.82■□□□□ 0.12
RB1P06400 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RB1P06400 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RB1P06400 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.82■□□□□ 0.12
RB1P06400 AL603832.2-201ENST00000566195 2125 ntBASIC15.82■□□□□ 0.12
RB1P06400 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RB1P06400 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RB1P06400 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.82■□□□□ 0.12
RB1P06400 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.82■□□□□ 0.12
RB1P06400 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.82■□□□□ 0.12
RB1P06400 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
RB1P06400 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RB1P06400 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RB1P06400 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15.82■□□□□ 0.12
RB1P06400 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.82■□□□□ 0.12
RB1P06400 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RB1P06400 AL627389.1-201ENST00000413508 1182 ntBASIC15.82■□□□□ 0.12
RB1P06400 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RB1P06400 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.82■□□□□ 0.12
RB1P06400 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.82■□□□□ 0.12
RB1P06400 CICP12-201ENST00000455801 843 ntBASIC15.82■□□□□ 0.12
RB1P06400 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.82■□□□□ 0.12
RB1P06400 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC15.82■□□□□ 0.12
RB1P06400 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.82■□□□□ 0.12
RB1P06400 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.82■□□□□ 0.12
RB1P06400 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.82■□□□□ 0.12
RB1P06400 PHBP15-201ENST00000574228 665 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms