Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 AZGP1P1-201ENST00000411909 902 ntBASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 NME2P1-201ENST00000426182 414 ntBASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 TPT1P11-201ENST00000458482 498 ntBASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 AL596325.1-201ENST00000563991 1082 ntBASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 AL662799.1-202ENST00000614205 422 ntBASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 AC055811.4-201ENST00000624039 1754 ntBASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCM2LQ9NUG4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 AC142381.1-201ENST00000426099 345 ntBASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 SPDYE14P-201ENST00000442619 822 ntBASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 SERBP1P5-201ENST00000510079 1181 ntBASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 MIR6080-201ENST00000617359 66 ntBASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCM2LQ9NUG4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 REXO1L4P-201ENST00000605109 1937 ntBASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.47□□□□□ -0.09
CCM2LQ9NUG4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms