Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.92□□□□□ -0.02
TTC28Q96AY4 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TTC28Q96AY4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
TTC28Q96AY4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC28Q96AY4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC28Q96AY4 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.92□□□□□ -0.02
TTC28Q96AY4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC28Q96AY4 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC28Q96AY4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.92□□□□□ -0.02
TTC28Q96AY4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC28Q96AY4 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC28Q96AY4 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TTC28Q96AY4 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC28Q96AY4 IFNWP2-201ENST00000431203 580 ntBASIC14.92□□□□□ -0.02
TTC28Q96AY4 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC14.92□□□□□ -0.02
TTC28Q96AY4 CDC37P2-201ENST00000562287 1029 ntBASIC14.92□□□□□ -0.02
TTC28Q96AY4 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC14.92□□□□□ -0.02
TTC28Q96AY4 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC14.92□□□□□ -0.02
TTC28Q96AY4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC28Q96AY4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TTC28Q96AY4 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC28Q96AY4 AC127383.1-201ENST00000444697 1800 ntBASIC14.92□□□□□ -0.02
TTC28Q96AY4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.92□□□□□ -0.02
TTC28Q96AY4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.92□□□□□ -0.02
TTC28Q96AY4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
TTC28Q96AY4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC28Q96AY4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TTC28Q96AY4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TTC28Q96AY4 RN7SL33P-201ENST00000462543 342 ntBASIC14.91□□□□□ -0.02
TTC28Q96AY4 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC14.91□□□□□ -0.02
TTC28Q96AY4 KRT18P37-201ENST00000520711 1282 ntBASIC14.91□□□□□ -0.02
TTC28Q96AY4 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC14.91□□□□□ -0.02
TTC28Q96AY4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC28Q96AY4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TTC28Q96AY4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TTC28Q96AY4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC28Q96AY4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TTC28Q96AY4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC28Q96AY4 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC28Q96AY4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC28Q96AY4 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC28Q96AY4 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC28Q96AY4 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC28Q96AY4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TTC28Q96AY4 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC14.91□□□□□ -0.02
TTC28Q96AY4 RN7SL523P-201ENST00000484401 298 ntBASIC14.91□□□□□ -0.02
TTC28Q96AY4 FAM86JP-202ENST00000484500 988 ntBASIC14.91□□□□□ -0.02
TTC28Q96AY4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.91□□□□□ -0.02
TTC28Q96AY4 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC14.91□□□□□ -0.02
TTC28Q96AY4 RNA5SP406-201ENST00000516106 112 ntBASIC14.91□□□□□ -0.02
TTC28Q96AY4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
TTC28Q96AY4 HNRNPA1P5-201ENST00000558213 966 ntBASIC14.91□□□□□ -0.02
TTC28Q96AY4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC28Q96AY4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC28Q96AY4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC28Q96AY4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TTC28Q96AY4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC28Q96AY4 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TTC28Q96AY4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC28Q96AY4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC28Q96AY4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC28Q96AY4 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC14.9□□□□□ -0.02
TTC28Q96AY4 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.9□□□□□ -0.02
TTC28Q96AY4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC28Q96AY4 RN7SL665P-201ENST00000578793 300 ntBASIC14.9□□□□□ -0.02
TTC28Q96AY4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TTC28Q96AY4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TTC28Q96AY4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC28Q96AY4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC28Q96AY4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC28Q96AY4 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TTC28Q96AY4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC28Q96AY4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.9□□□□□ -0.02
TTC28Q96AY4 AC106886.4-201ENST00000623557 2502 ntBASIC14.9□□□□□ -0.02
TTC28Q96AY4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC28Q96AY4 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TTC28Q96AY4 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TTC28Q96AY4 RN7SKP230-201ENST00000365642 335 ntBASIC14.9□□□□□ -0.02
TTC28Q96AY4 AC073869.2-201ENST00000417338 1026 ntBASIC14.9□□□□□ -0.02
TTC28Q96AY4 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC14.9□□□□□ -0.02
TTC28Q96AY4 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TTC28Q96AY4 AC093106.1-201ENST00000437271 352 ntBASIC14.9□□□□□ -0.02
TTC28Q96AY4 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
TTC28Q96AY4 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC28Q96AY4 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TTC28Q96AY4 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC14.9□□□□□ -0.02
TTC28Q96AY4 MIR6819-201ENST00000622122 61 ntBASIC14.9□□□□□ -0.02
TTC28Q96AY4 AC005274.1-201ENST00000623460 802 ntBASIC14.9□□□□□ -0.02
TTC28Q96AY4 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC14.9□□□□□ -0.02
TTC28Q96AY4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TTC28Q96AY4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TTC28Q96AY4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.9□□□□□ -0.02
TTC28Q96AY4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TTC28Q96AY4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TTC28Q96AY4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.9□□□□□ -0.02
TTC28Q96AY4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TTC28Q96AY4 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
TTC28Q96AY4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TTC28Q96AY4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.89□□□□□ -0.03
TTC28Q96AY4 KRT18P44-201ENST00000416086 1285 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms