Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 OR52M2P-201ENST00000414298 959 ntBASIC12.73□□□□□ -0.37
GCN1Q92616 DUX4L50-201ENST00000455245 715 ntBASIC12.73□□□□□ -0.37
GCN1Q92616 RNU1-80P-201ENST00000459500 161 ntBASIC12.73□□□□□ -0.37
GCN1Q92616 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC12.73□□□□□ -0.37
GCN1Q92616 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
GCN1Q92616 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC12.73□□□□□ -0.37
GCN1Q92616 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC12.73□□□□□ -0.37
GCN1Q92616 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC12.73□□□□□ -0.37
GCN1Q92616 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.73□□□□□ -0.37
GCN1Q92616 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
GCN1Q92616 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
GCN1Q92616 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
GCN1Q92616 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
GCN1Q92616 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
GCN1Q92616 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.72□□□□□ -0.37
GCN1Q92616 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
GCN1Q92616 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
GCN1Q92616 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.72□□□□□ -0.37
GCN1Q92616 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC12.72□□□□□ -0.37
GCN1Q92616 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.72□□□□□ -0.37
GCN1Q92616 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.72□□□□□ -0.37
GCN1Q92616 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.72□□□□□ -0.37
GCN1Q92616 KRT8P1-201ENST00000557533 1207 ntBASIC12.72□□□□□ -0.37
GCN1Q92616 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
GCN1Q92616 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC12.72□□□□□ -0.37
GCN1Q92616 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
GCN1Q92616 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.72□□□□□ -0.37
GCN1Q92616 AL137783.1-201ENST00000623494 1896 ntBASIC12.72□□□□□ -0.37
GCN1Q92616 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.72□□□□□ -0.37
GCN1Q92616 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.72□□□□□ -0.37
GCN1Q92616 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
GCN1Q92616 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.72□□□□□ -0.37
GCN1Q92616 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 AC006449.6-201ENST00000612330 2296 ntBASIC12.72□□□□□ -0.37
GCN1Q92616 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
GCN1Q92616 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
GCN1Q92616 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
GCN1Q92616 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC12.72□□□□□ -0.37
GCN1Q92616 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
GCN1Q92616 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
GCN1Q92616 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.72□□□□□ -0.37
GCN1Q92616 OR8T1P-201ENST00000421347 918 ntBASIC12.72□□□□□ -0.37
GCN1Q92616 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC12.72□□□□□ -0.37
GCN1Q92616 RPL10P8-201ENST00000522888 313 ntBASIC12.72□□□□□ -0.37
GCN1Q92616 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.72□□□□□ -0.37
GCN1Q92616 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC12.72□□□□□ -0.37
GCN1Q92616 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
GCN1Q92616 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
GCN1Q92616 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC12.72□□□□□ -0.37
GCN1Q92616 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GCN1Q92616 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.72□□□□□ -0.37
GCN1Q92616 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.71□□□□□ -0.37
GCN1Q92616 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.71□□□□□ -0.37
GCN1Q92616 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCN1Q92616 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCN1Q92616 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCN1Q92616 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
GCN1Q92616 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCN1Q92616 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCN1Q92616 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.71□□□□□ -0.37
GCN1Q92616 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCN1Q92616 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCN1Q92616 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCN1Q92616 RPSAP12-201ENST00000435879 888 ntBASIC12.71□□□□□ -0.37
GCN1Q92616 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC12.71□□□□□ -0.37
GCN1Q92616 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.71□□□□□ -0.37
GCN1Q92616 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.71□□□□□ -0.37
GCN1Q92616 NT5C-204ENST00000578337 582 ntTSL 2 BASIC12.71□□□□□ -0.37
GCN1Q92616 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCN1Q92616 AC022296.3-201ENST00000608823 403 ntBASIC12.71□□□□□ -0.37
GCN1Q92616 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.71□□□□□ -0.37
GCN1Q92616 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.71□□□□□ -0.37
GCN1Q92616 BICD1-207ENST00000551848 1962 ntBASIC12.71□□□□□ -0.37
GCN1Q92616 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.71□□□□□ -0.37
GCN1Q92616 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
GCN1Q92616 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCN1Q92616 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCN1Q92616 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCN1Q92616 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
GCN1Q92616 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms