Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 AC098614.1-201ENST00000368528 745 ntBASIC15.47■□□□□ 0.07
PTCD2Q8WV60 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 U91328.1-201ENST00000437528 223 ntBASIC15.47■□□□□ 0.07
PTCD2Q8WV60 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 AL353718.1-201ENST00000451028 517 ntBASIC15.47■□□□□ 0.07
PTCD2Q8WV60 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 OSTCP1-202ENST00000522287 1195 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTCD2Q8WV60 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 CRYGB-201ENST00000260988 641 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 AC005534.1-201ENST00000455709 742 ntTSL 2 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.46■□□□□ 0.07
PTCD2Q8WV60 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 AC036164.1-201ENST00000570544 333 ntBASIC15.46■□□□□ 0.07
PTCD2Q8WV60 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 AC110792.4-201ENST00000609843 298 ntBASIC15.46■□□□□ 0.07
PTCD2Q8WV60 AC097520.1-201ENST00000624435 385 ntBASIC15.46■□□□□ 0.07
PTCD2Q8WV60 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 CICP4-201ENST00000447359 2812 ntBASIC15.46■□□□□ 0.07
PTCD2Q8WV60 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTCD2Q8WV60 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PTCD2Q8WV60 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PTCD2Q8WV60 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
PTCD2Q8WV60 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.46■□□□□ 0.06
PTCD2Q8WV60 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms