Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COPAP53621 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COPAP53621 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.7■□□□□ 0.1
COPAP53621 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COPAP53621 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.7■□□□□ 0.1
COPAP53621 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COPAP53621 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.7■□□□□ 0.1
COPAP53621 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COPAP53621 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COPAP53621 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COPAP53621 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
COPAP53621 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.69■□□□□ 0.1
COPAP53621 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.69■□□□□ 0.1
COPAP53621 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.69■□□□□ 0.1
COPAP53621 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
COPAP53621 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COPAP53621 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.69■□□□□ 0.1
COPAP53621 AC105250.1-201ENST00000509378 2057 ntBASIC15.69■□□□□ 0.1
COPAP53621 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COPAP53621 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COPAP53621 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
COPAP53621 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COPAP53621 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COPAP53621 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.69■□□□□ 0.1
COPAP53621 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
COPAP53621 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.69■□□□□ 0.1
COPAP53621 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.69■□□□□ 0.1
COPAP53621 AC016694.1-201ENST00000434179 700 ntBASIC15.69■□□□□ 0.1
COPAP53621 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COPAP53621 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COPAP53621 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.69■□□□□ 0.1
COPAP53621 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COPAP53621 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
COPAP53621 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.69■□□□□ 0.1
COPAP53621 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COPAP53621 RNA5SP412-201ENST00000516234 123 ntBASIC15.69■□□□□ 0.1
COPAP53621 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.69■□□□□ 0.1
COPAP53621 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.69■□□□□ 0.1
COPAP53621 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.69■□□□□ 0.1
COPAP53621 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.69■□□□□ 0.1
COPAP53621 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
COPAP53621 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
COPAP53621 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.69■□□□□ 0.1
COPAP53621 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COPAP53621 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COPAP53621 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.69■□□□□ 0.1
COPAP53621 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
COPAP53621 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COPAP53621 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
COPAP53621 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COPAP53621 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
COPAP53621 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.69■□□□□ 0.1
COPAP53621 AC091951.1-201ENST00000512854 2465 ntBASIC15.69■□□□□ 0.1
COPAP53621 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.69■□□□□ 0.1
COPAP53621 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
COPAP53621 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COPAP53621 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
COPAP53621 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
COPAP53621 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
COPAP53621 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COPAP53621 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COPAP53621 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COPAP53621 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
COPAP53621 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COPAP53621 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COPAP53621 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COPAP53621 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COPAP53621 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COPAP53621 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COPAP53621 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
COPAP53621 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COPAP53621 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.68■□□□□ 0.1
COPAP53621 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.68■□□□□ 0.1
COPAP53621 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COPAP53621 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COPAP53621 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COPAP53621 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.68■□□□□ 0.1
COPAP53621 MIR1908-201ENST00000410394 80 ntBASIC15.68■□□□□ 0.1
COPAP53621 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.68■□□□□ 0.1
COPAP53621 ACTBP11-201ENST00000436287 1126 ntBASIC15.68■□□□□ 0.1
COPAP53621 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
COPAP53621 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COPAP53621 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.68■□□□□ 0.1
COPAP53621 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.68■□□□□ 0.1
COPAP53621 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.68■□□□□ 0.1
COPAP53621 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.68■□□□□ 0.1
COPAP53621 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.68■□□□□ 0.1
COPAP53621 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.68■□□□□ 0.1
COPAP53621 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
COPAP53621 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COPAP53621 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.68■□□□□ 0.1
COPAP53621 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
COPAP53621 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COPAP53621 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COPAP53621 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
COPAP53621 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COPAP53621 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.68■□□□□ 0.1
COPAP53621 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.68■□□□□ 0.1
COPAP53621 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COPAP53621 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms