Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
HCFC1P51610 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.09□□□□□ -0.31
HCFC1P51610 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.09□□□□□ -0.31
HCFC1P51610 REXO1L5P-201ENST00000622260 2098 ntBASIC13.09□□□□□ -0.31
HCFC1P51610 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 TMBIM7P-203ENST00000641617 1718 ntBASIC13.09□□□□□ -0.31
HCFC1P51610 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HCFC1P51610 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
HCFC1P51610 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
HCFC1P51610 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
HCFC1P51610 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.09□□□□□ -0.31
HCFC1P51610 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.09□□□□□ -0.31
HCFC1P51610 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.09□□□□□ -0.31
HCFC1P51610 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
HCFC1P51610 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.09□□□□□ -0.31
HCFC1P51610 AC104784.1-201ENST00000473096 294 ntBASIC13.09□□□□□ -0.31
HCFC1P51610 PRKXP1-201ENST00000561423 1122 ntBASIC13.09□□□□□ -0.31
HCFC1P51610 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.09□□□□□ -0.31
HCFC1P51610 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC13.09□□□□□ -0.31
HCFC1P51610 AC004923.1-202ENST00000642106 209 ntBASIC13.09□□□□□ -0.31
HCFC1P51610 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
HCFC1P51610 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
HCFC1P51610 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
HCFC1P51610 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 CICP13-201ENST00000422015 2789 ntBASIC13.08□□□□□ -0.31
HCFC1P51610 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
HCFC1P51610 SSR4P1-203ENST00000599569 2260 ntBASIC13.08□□□□□ -0.31
HCFC1P51610 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
HCFC1P51610 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HCFC1P51610 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.08□□□□□ -0.31
HCFC1P51610 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
HCFC1P51610 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
HCFC1P51610 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
HCFC1P51610 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HCFC1P51610 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HCFC1P51610 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.08□□□□□ -0.31
HCFC1P51610 RCC2P8-201ENST00000502779 1035 ntBASIC13.08□□□□□ -0.31
HCFC1P51610 CTBP2P4-201ENST00000513884 920 ntBASIC13.08□□□□□ -0.31
HCFC1P51610 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC13.08□□□□□ -0.31
HCFC1P51610 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.31
HCFC1P51610 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HCFC1P51610 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
HCFC1P51610 RN7SL555P-201ENST00000584742 339 ntBASIC13.08□□□□□ -0.31
HCFC1P51610 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.08□□□□□ -0.32
HCFC1P51610 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
HCFC1P51610 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 AC011840.2-201ENST00000563063 1520 ntBASIC13.08□□□□□ -0.32
HCFC1P51610 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
HCFC1P51610 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.08□□□□□ -0.32
HCFC1P51610 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.08□□□□□ -0.32
HCFC1P51610 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
HCFC1P51610 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
HCFC1P51610 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.08□□□□□ -0.32
HCFC1P51610 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
HCFC1P51610 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.08□□□□□ -0.32
HCFC1P51610 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.08□□□□□ -0.32
HCFC1P51610 VDAC1P1-201ENST00000439229 848 ntBASIC13.08□□□□□ -0.32
HCFC1P51610 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
HCFC1P51610 AC073150.1-201ENST00000450406 1084 ntBASIC13.08□□□□□ -0.32
HCFC1P51610 NOC2LP1-201ENST00000450578 752 ntBASIC13.08□□□□□ -0.32
HCFC1P51610 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
HCFC1P51610 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.08□□□□□ -0.32
HCFC1P51610 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
HCFC1P51610 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.08□□□□□ -0.32
HCFC1P51610 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
HCFC1P51610 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.08□□□□□ -0.32
HCFC1P51610 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HCFC1P51610 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms