Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPT1AP50416 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.62■□□□□ 0.25
CPT1AP50416 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPT1AP50416 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CPT1AP50416 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CPT1AP50416 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.62■□□□□ 0.25
CPT1AP50416 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPT1AP50416 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.62■□□□□ 0.25
CPT1AP50416 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.61■□□□□ 0.25
CPT1AP50416 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 SALL4P5-201ENST00000419001 1760 ntBASIC16.61■□□□□ 0.25
CPT1AP50416 FER1L4-210ENST00000615531 5998 ntBASIC16.61■□□□□ 0.25
CPT1AP50416 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CPT1AP50416 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.61■□□□□ 0.25
CPT1AP50416 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.61■□□□□ 0.25
CPT1AP50416 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CPT1AP50416 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.61■□□□□ 0.25
CPT1AP50416 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.61■□□□□ 0.25
CPT1AP50416 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CPT1AP50416 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 AC020658.6-201ENST00000623564 1870 ntBASIC16.61■□□□□ 0.25
CPT1AP50416 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CPT1AP50416 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.61■□□□□ 0.25
CPT1AP50416 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.61■□□□□ 0.25
CPT1AP50416 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.61■□□□□ 0.25
CPT1AP50416 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.61■□□□□ 0.25
CPT1AP50416 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CPT1AP50416 SCARNA21-201ENST00000517026 139 ntBASIC16.61■□□□□ 0.25
CPT1AP50416 POU5F1P2-201ENST00000521750 823 ntBASIC16.61■□□□□ 0.25
CPT1AP50416 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CPT1AP50416 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.61■□□□□ 0.25
CPT1AP50416 BX088702.1-201ENST00000610784 235 ntBASIC16.61■□□□□ 0.25
CPT1AP50416 AC027601.3-201ENST00000622907 509 ntBASIC16.61■□□□□ 0.25
CPT1AP50416 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.61■□□□□ 0.25
CPT1AP50416 AC006453.1-201ENST00000636037 1257 ntBASIC16.61■□□□□ 0.25
CPT1AP50416 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 AC026691.1-201ENST00000602502 2017 ntBASIC16.61■□□□□ 0.25
CPT1AP50416 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.61■□□□□ 0.25
CPT1AP50416 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPT1AP50416 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.61■□□□□ 0.25
CPT1AP50416 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CPT1AP50416 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPT1AP50416 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPT1AP50416 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPT1AP50416 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPT1AP50416 AP000845.1-201ENST00000581677 2131 ntBASIC16.6■□□□□ 0.25
CPT1AP50416 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPT1AP50416 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.6■□□□□ 0.25
CPT1AP50416 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPT1AP50416 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPT1AP50416 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.6■□□□□ 0.25
CPT1AP50416 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CPT1AP50416 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.6■□□□□ 0.25
CPT1AP50416 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.6■□□□□ 0.25
CPT1AP50416 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPT1AP50416 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.6■□□□□ 0.25
CPT1AP50416 AC078875.1-201ENST00000431907 724 ntBASIC16.6■□□□□ 0.25
CPT1AP50416 AL035414.1-201ENST00000451327 857 ntBASIC16.6■□□□□ 0.25
CPT1AP50416 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.6■□□□□ 0.25
CPT1AP50416 AC116345.2-201ENST00000512837 523 ntBASIC16.6■□□□□ 0.25
CPT1AP50416 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.6■□□□□ 0.25
CPT1AP50416 AC242376.1-201ENST00000559033 726 ntBASIC16.6■□□□□ 0.25
CPT1AP50416 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.6■□□□□ 0.25
CPT1AP50416 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.6■□□□□ 0.25
CPT1AP50416 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.6■□□□□ 0.25
CPT1AP50416 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.6■□□□□ 0.25
CPT1AP50416 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPT1AP50416 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.6■□□□□ 0.25
CPT1AP50416 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.6■□□□□ 0.25
CPT1AP50416 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPT1AP50416 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPT1AP50416 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.6■□□□□ 0.25
CPT1AP50416 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.6■□□□□ 0.25
CPT1AP50416 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPT1AP50416 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPT1AP50416 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPT1AP50416 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CPT1AP50416 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.6■□□□□ 0.25
CPT1AP50416 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CPT1AP50416 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CPT1AP50416 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.6■□□□□ 0.25
CPT1AP50416 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms