Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
MDH1P40925 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MDH1P40925 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
MDH1P40925 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MDH1P40925 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
MDH1P40925 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.25■□□□□ 0.03
MDH1P40925 TSN-212ENST00000536142 3328 ntTSL 2 BASIC15.25■□□□□ 0.03
MDH1P40925 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC15.25■□□□□ 0.03
MDH1P40925 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MDH1P40925 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MDH1P40925 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.25■□□□□ 0.03
MDH1P40925 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
MDH1P40925 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.24■□□□□ 0.03
MDH1P40925 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MDH1P40925 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.24■□□□□ 0.03
MDH1P40925 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.24■□□□□ 0.03
MDH1P40925 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC15.24■□□□□ 0.03
MDH1P40925 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC15.24■□□□□ 0.03
MDH1P40925 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.24■□□□□ 0.03
MDH1P40925 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
MDH1P40925 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
MDH1P40925 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.24■□□□□ 0.03
MDH1P40925 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
MDH1P40925 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
MDH1P40925 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
MDH1P40925 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.24■□□□□ 0.03
MDH1P40925 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 AL121772.3-201ENST00000610840 674 ntBASIC15.24■□□□□ 0.03
MDH1P40925 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.24■□□□□ 0.03
MDH1P40925 AC010507.1-201ENST00000633895 436 ntBASIC15.24■□□□□ 0.03
MDH1P40925 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.24■□□□□ 0.03
MDH1P40925 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC15.24■□□□□ 0.03
MDH1P40925 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
MDH1P40925 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MDH1P40925 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MDH1P40925 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
MDH1P40925 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
MDH1P40925 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
MDH1P40925 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MDH1P40925 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
MDH1P40925 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MDH1P40925 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.23■□□□□ 0.03
MDH1P40925 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MDH1P40925 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MDH1P40925 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC15.23■□□□□ 0.03
MDH1P40925 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MDH1P40925 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.23■□□□□ 0.03
MDH1P40925 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MDH1P40925 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MDH1P40925 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.23■□□□□ 0.03
MDH1P40925 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.23■□□□□ 0.03
MDH1P40925 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MDH1P40925 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
MDH1P40925 SAPCD2P3-201ENST00000455031 850 ntBASIC15.23■□□□□ 0.03
MDH1P40925 AC073648.2-201ENST00000510116 352 ntBASIC15.23■□□□□ 0.03
MDH1P40925 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.23■□□□□ 0.03
MDH1P40925 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.23■□□□□ 0.03
MDH1P40925 AC015910.1-201ENST00000579400 975 ntBASIC15.23■□□□□ 0.03
MDH1P40925 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.23■□□□□ 0.03
MDH1P40925 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.23■□□□□ 0.03
MDH1P40925 AC026979.3-201ENST00000607315 403 ntBASIC15.23■□□□□ 0.03
MDH1P40925 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.23■□□□□ 0.03
MDH1P40925 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
MDH1P40925 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
MDH1P40925 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC15.23■□□□□ 0.03
MDH1P40925 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MDH1P40925 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.23■□□□□ 0.03
MDH1P40925 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MDH1P40925 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
MDH1P40925 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MDH1P40925 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MDH1P40925 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MDH1P40925 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MDH1P40925 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
MDH1P40925 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.23■□□□□ 0.03
MDH1P40925 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MDH1P40925 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.22■□□□□ 0.03
MDH1P40925 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms