Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6V1AP38606 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.08■□□□□ 0.64
ATP6V1AP38606 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6V1AP38606 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.08■□□□□ 0.64
ATP6V1AP38606 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6V1AP38606 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6V1AP38606 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
ATP6V1AP38606 RAN-210ENST00000541630 1475 ntTSL 2 BASIC19.08■□□□□ 0.64
ATP6V1AP38606 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6V1AP38606 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
ATP6V1AP38606 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP6V1AP38606 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V1AP38606 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V1AP38606 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC19.07■□□□□ 0.64
ATP6V1AP38606 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V1AP38606 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V1AP38606 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V1AP38606 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V1AP38606 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ATP6V1AP38606 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
ATP6V1AP38606 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP6V1AP38606 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V1AP38606 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ATP6V1AP38606 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ATP6V1AP38606 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
ATP6V1AP38606 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V1AP38606 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V1AP38606 AL157407.1-201ENST00000435784 904 ntBASIC19.07■□□□□ 0.64
ATP6V1AP38606 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V1AP38606 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V1AP38606 NAT9-220ENST00000582870 896 ntTSL 5 BASIC19.07■□□□□ 0.64
ATP6V1AP38606 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP6V1AP38606 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC19.07■□□□□ 0.64
ATP6V1AP38606 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
ATP6V1AP38606 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ATP6V1AP38606 AC009084.3-201ENST00000623356 437 ntBASIC19.07■□□□□ 0.64
ATP6V1AP38606 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V1AP38606 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V1AP38606 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V1AP38606 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP6V1AP38606 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.07■□□□□ 0.64
ATP6V1AP38606 AC144522.1-201ENST00000625111 1658 ntBASIC19.07■□□□□ 0.64
ATP6V1AP38606 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ATP6V1AP38606 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V1AP38606 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP6V1AP38606 API5-202ENST00000420461 2009 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP6V1AP38606 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP6V1AP38606 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6V1AP38606 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6V1AP38606 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6V1AP38606 FRMPD2B-201ENST00000431305 1347 ntBASIC19.06■□□□□ 0.64
ATP6V1AP38606 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6V1AP38606 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6V1AP38606 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6V1AP38606 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6V1AP38606 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6V1AP38606 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 NCR3-202ENST00000376071 541 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 AC006122.1-201ENST00000493323 440 ntBASIC19.06■□□□□ 0.64
ATP6V1AP38606 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6V1AP38606 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6V1AP38606 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6V1AP38606 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6V1AP38606 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6V1AP38606 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6V1AP38606 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP6V1AP38606 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP6V1AP38606 AC090616.6-203ENST00000579186 1945 ntBASIC19.06■□□□□ 0.64
ATP6V1AP38606 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.05■□□□□ 0.64
ATP6V1AP38606 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6V1AP38606 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6V1AP38606 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.05■□□□□ 0.64
ATP6V1AP38606 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.05■□□□□ 0.64
ATP6V1AP38606 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6V1AP38606 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6V1AP38606 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC19.05■□□□□ 0.64
ATP6V1AP38606 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP6V1AP38606 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC19.05■□□□□ 0.64
ATP6V1AP38606 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ATP6V1AP38606 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.05■□□□□ 0.64
ATP6V1AP38606 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC19.05■□□□□ 0.64
ATP6V1AP38606 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms