Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC24.43■■□□□ 1.5
BIVM-ERCC5R4GMW8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC24.43■■□□□ 1.5
BIVM-ERCC5R4GMW8 AC009084.3-201ENST00000623356 437 ntBASIC24.43■■□□□ 1.5
BIVM-ERCC5R4GMW8 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
BIVM-ERCC5R4GMW8 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
BIVM-ERCC5R4GMW8 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC24.43■■□□□ 1.5
BIVM-ERCC5R4GMW8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC24.43■■□□□ 1.5
BIVM-ERCC5R4GMW8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
BIVM-ERCC5R4GMW8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
BIVM-ERCC5R4GMW8 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC24.43■■□□□ 1.5
BIVM-ERCC5R4GMW8 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC24.43■■□□□ 1.5
BIVM-ERCC5R4GMW8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
BIVM-ERCC5R4GMW8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
BIVM-ERCC5R4GMW8 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
BIVM-ERCC5R4GMW8 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC24.43■■□□□ 1.5
BIVM-ERCC5R4GMW8 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC24.43■■□□□ 1.5
BIVM-ERCC5R4GMW8 AC138466.5-201ENST00000624002 808 ntBASIC24.43■■□□□ 1.5
BIVM-ERCC5R4GMW8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 KRT17P5-201ENST00000332088 839 ntBASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 AL592076.1-201ENST00000424448 303 ntBASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 ERP29P1-201ENST00000442902 706 ntBASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 AC141586.1-203ENST00000567242 366 ntBASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 AC005357.2-202ENST00000590507 1060 ntBASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 NAMA-206ENST00000605377 509 ntTSL 5 BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
BIVM-ERCC5R4GMW8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
BIVM-ERCC5R4GMW8 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 AL354861.1-201ENST00000445213 355 ntBASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 LINC00634-202ENST00000505157 222 ntBASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 CR383656.3-201ENST00000551315 183 ntBASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 MIR3180-2-201ENST00000581748 88 ntBASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 AC006504.5-208ENST00000588784 2401 ntBASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
BIVM-ERCC5R4GMW8 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms