Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 AL096828.3-201ENST00000615354 462 ntBASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTDP1Q9Y5B0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 AC099398.1-201ENST00000567919 2776 ntBASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTDP1Q9Y5B0 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 AC087481.3-201ENST00000602886 1894 ntBASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 AC008894.3-201ENST00000624324 3103 ntBASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 HLA-K-203ENST00000430151 1046 ntBASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 AC090616.6-203ENST00000579186 1945 ntBASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms