Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 MIR326-201ENST00000362220 95 ntBASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 PFN1P12-201ENST00000455938 534 ntBASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 MESTP3-201ENST00000503460 968 ntBASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 COX5BP1-201ENST00000507622 393 ntBASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 AP006547.1-201ENST00000563435 692 ntBASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 RN7SL713P-201ENST00000582127 302 ntBASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.47□□□□□ -0.25
CLCF1Q9UBD9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 AL137783.1-201ENST00000623494 1896 ntBASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 AC023024.2-201ENST00000623561 1993 ntBASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 MTX1P1-201ENST00000440904 838 ntBASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 FTLP10-202ENST00000505798 471 ntBASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 AL391280.1-201ENST00000506969 1062 ntBASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 AC073413.1-201ENST00000603927 732 ntBASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
CLCF1Q9UBD9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLCF1Q9UBD9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLCF1Q9UBD9 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLCF1Q9UBD9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
CLCF1Q9UBD9 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.46□□□□□ -0.26
CLCF1Q9UBD9 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLCF1Q9UBD9 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.46□□□□□ -0.26
CLCF1Q9UBD9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLCF1Q9UBD9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CLCF1Q9UBD9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLCF1Q9UBD9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.46□□□□□ -0.26
CLCF1Q9UBD9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.46□□□□□ -0.26
CLCF1Q9UBD9 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLCF1Q9UBD9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.46□□□□□ -0.26
CLCF1Q9UBD9 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 MROH4P-201ENST00000431302 1578 ntBASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 AC015818.8-201ENST00000587907 1519 ntBASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.45□□□□□ -0.26
CLCF1Q9UBD9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms