Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC108725.1-201ENST00000495472 409 ntBASIC13.94□□□□□ -0.18
LRFN1Q9P244 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRFN1Q9P244 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRFN1Q9P244 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.94□□□□□ -0.18
LRFN1Q9P244 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.94□□□□□ -0.18
LRFN1Q9P244 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRFN1Q9P244 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.94□□□□□ -0.18
LRFN1Q9P244 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRFN1Q9P244 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.94□□□□□ -0.18
LRFN1Q9P244 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRFN1Q9P244 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LRFN1Q9P244 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.94□□□□□ -0.18
LRFN1Q9P244 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.94□□□□□ -0.18
LRFN1Q9P244 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRFN1Q9P244 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRFN1Q9P244 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRFN1Q9P244 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRFN1Q9P244 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.94□□□□□ -0.18
LRFN1Q9P244 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRFN1Q9P244 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRFN1Q9P244 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 MIR326-201ENST00000362220 95 ntBASIC13.93□□□□□ -0.18
LRFN1Q9P244 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 HOMER2P2-201ENST00000451621 847 ntBASIC13.93□□□□□ -0.18
LRFN1Q9P244 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.93□□□□□ -0.18
LRFN1Q9P244 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRFN1Q9P244 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 AC007950.2-201ENST00000615045 2347 ntBASIC13.92□□□□□ -0.18
LRFN1Q9P244 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.92□□□□□ -0.18
LRFN1Q9P244 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRFN1Q9P244 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms