Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 OLA1P2-201ENST00000395519 1264 ntBASIC14.43□□□□□ -0.1
RIF1Q5UIP0 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 RN7SL121P-201ENST00000584223 273 ntBASIC14.43□□□□□ -0.1
RIF1Q5UIP0 AP000322.3-201ENST00000608665 388 ntBASIC14.43□□□□□ -0.1
RIF1Q5UIP0 AL512324.3-201ENST00000619383 882 ntBASIC14.43□□□□□ -0.1
RIF1Q5UIP0 AC084364.1-201ENST00000551967 1556 ntBASIC14.43□□□□□ -0.1
RIF1Q5UIP0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.42□□□□□ -0.1
RIF1Q5UIP0 XBP1P1-201ENST00000436573 652 ntBASIC14.42□□□□□ -0.1
RIF1Q5UIP0 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 AC120498.5-201ENST00000561757 299 ntBASIC14.42□□□□□ -0.1
RIF1Q5UIP0 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 AC015912.3-201ENST00000619432 348 ntBASIC14.42□□□□□ -0.1
RIF1Q5UIP0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 AC078925.2-201ENST00000624013 1973 ntBASIC14.42□□□□□ -0.1
RIF1Q5UIP0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 AL662844.4-201ENST00000606367 2838 ntBASIC14.42□□□□□ -0.1
RIF1Q5UIP0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 AC098657.1-201ENST00000416270 1135 ntBASIC14.42□□□□□ -0.1
RIF1Q5UIP0 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 AC090136.2-201ENST00000517809 420 ntBASIC14.42□□□□□ -0.1
RIF1Q5UIP0 FOXN3-AS2-201ENST00000554071 1262 ntBASIC14.42□□□□□ -0.1
RIF1Q5UIP0 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 AC006116.2-201ENST00000589958 988 ntBASIC14.42□□□□□ -0.1
RIF1Q5UIP0 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms