Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
UBA52P62987 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 MTND6P24-201ENST00000440466 518 ntBASIC13.21□□□□□ -0.29
UBA52P62987 AC009477.1-201ENST00000452936 217 ntBASIC13.21□□□□□ -0.29
UBA52P62987 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.21□□□□□ -0.29
UBA52P62987 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.21□□□□□ -0.29
UBA52P62987 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.21□□□□□ -0.29
UBA52P62987 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.21□□□□□ -0.29
UBA52P62987 MIR4492-201ENST00000581627 80 ntBASIC13.21□□□□□ -0.29
UBA52P62987 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.21□□□□□ -0.29
UBA52P62987 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.21□□□□□ -0.29
UBA52P62987 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
UBA52P62987 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.21□□□□□ -0.29
UBA52P62987 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.21□□□□□ -0.29
UBA52P62987 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
UBA52P62987 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBA52P62987 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.21□□□□□ -0.29
UBA52P62987 AC027601.5-201ENST00000624065 2482 ntBASIC13.21□□□□□ -0.29
UBA52P62987 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBA52P62987 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
UBA52P62987 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBA52P62987 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBA52P62987 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
UBA52P62987 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
UBA52P62987 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBA52P62987 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBA52P62987 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
UBA52P62987 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
UBA52P62987 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
UBA52P62987 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
UBA52P62987 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBA52P62987 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBA52P62987 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBA52P62987 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBA52P62987 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.21□□□□□ -0.3
UBA52P62987 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
UBA52P62987 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 AC087499.5-201ENST00000452760 1342 ntBASIC13.2□□□□□ -0.3
UBA52P62987 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 CICP8-201ENST00000455800 2813 ntBASIC13.2□□□□□ -0.3
UBA52P62987 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.2□□□□□ -0.3
UBA52P62987 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
UBA52P62987 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.2□□□□□ -0.3
UBA52P62987 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
UBA52P62987 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.2□□□□□ -0.3
UBA52P62987 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.2□□□□□ -0.3
UBA52P62987 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.2□□□□□ -0.3
UBA52P62987 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.2□□□□□ -0.3
UBA52P62987 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
UBA52P62987 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.2□□□□□ -0.3
UBA52P62987 AL589739.1-201ENST00000607720 493 ntBASIC13.2□□□□□ -0.3
UBA52P62987 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 TEX28P1-201ENST00000613479 1221 ntBASIC13.2□□□□□ -0.3
UBA52P62987 TEX28P2-201ENST00000617764 1221 ntBASIC13.2□□□□□ -0.3
UBA52P62987 MIR6752-201ENST00000618442 71 ntBASIC13.2□□□□□ -0.3
UBA52P62987 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.2□□□□□ -0.3
UBA52P62987 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.2□□□□□ -0.3
UBA52P62987 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBA52P62987 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms