Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 EIF3FP3-201ENST00000434851 1086 ntBASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 FAM8A4P-201ENST00000435433 1213 ntBASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 PRAL-201ENST00000624952 3286 ntBASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40ALP0C0E4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 BCYRN1-201ENST00000418539 200 ntBASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 AC007969.1-201ENST00000433675 447 ntBASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 AC104306.2-201ENST00000451877 341 ntBASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 RPSAP36-202ENST00000494591 1261 ntBASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 AL008638.5-201ENST00000623814 1298 ntBASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40ALP0C0E4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 AC079178.1-201ENST00000420915 656 ntBASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 AC004898.1-201ENST00000451057 766 ntBASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RAB40ALP0C0E4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms