Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 AC008132.1-202ENST00000342005 1389 ntBASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
DNMT3BQ9UBC3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 ACTG1P2-201ENST00000415776 1125 ntBASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 ACTG1P11-201ENST00000425411 1125 ntBASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 AC106794.1-201ENST00000506935 792 ntBASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 AC009955.4-201ENST00000597192 544 ntBASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 AC144831.1-201ENST00000573312 2656 ntBASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 DBET-201ENST00000630918 3363 ntBASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DNMT3BQ9UBC3 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 AC020910.5-201ENST00000623668 1865 ntBASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 HINT2P1-201ENST00000419438 481 ntBASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 AC011742.3-201ENST00000439053 820 ntBASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 AC100827.2-201ENST00000563214 1194 ntBASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 RN7SL574P-201ENST00000581512 297 ntBASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 AC005324.6-201ENST00000587972 613 ntBASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 AC138696.2-201ENST00000607376 223 ntBASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 AC100757.4-201ENST00000626934 759 ntBASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 AC068587.8-201ENST00000641239 219 ntBASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.71■□□□□ 0.11
DNMT3BQ9UBC3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms