Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PES1-205ENST00000405677 2708 ntTSL 2 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 PRAMEF27-201ENST00000436041 1863 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 RBFOX1-224ENST00000641259 3651 ntBASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 DUSP16-202ENST00000298573 5253 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 FBN2-201ENST00000262464 10724 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 FBLN5-201ENST00000267620 2423 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 AL139220.2-207ENST00000434244 2644 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CDC42SE1Q9NRR8 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC7.59□□□□□ -1.2
CDC42SE1Q9NRR8 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
CDC42SE1Q9NRR8 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.2
CDC42SE1Q9NRR8 MED29-207ENST00000615911 3565 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.2
CDC42SE1Q9NRR8 ZHX1-206ENST00000522655 3357 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.2
CDC42SE1Q9NRR8 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
CDC42SE1Q9NRR8 PIK3C2B-204ENST00000424712 7522 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
CDC42SE1Q9NRR8 C8B-206ENST00000543257 2382 ntTSL 2 BASIC7.59□□□□□ -1.2
CDC42SE1Q9NRR8 MX1-218ENST00000619682 1980 ntTSL 5 BASIC7.59□□□□□ -1.2
CDC42SE1Q9NRR8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
CDC42SE1Q9NRR8 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
CDC42SE1Q9NRR8 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC7.59□□□□□ -1.2
CDC42SE1Q9NRR8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.2
CDC42SE1Q9NRR8 IFFO1-205ENST00000436152 3101 ntTSL 2 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 YLPM1-201ENST00000325680 7108 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 SIRPG-202ENST00000303415 1716 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 SIRPG-204ENST00000381580 1732 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 NUTM2B-202ENST00000372321 3970 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 CDH2-201ENST00000269141 4332 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 FAM95B1-212ENST00000592873 4692 ntBASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 CICP19-201ENST00000632944 2357 ntBASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 KRT18P68-201ENST00000392293 1000 ntBASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 AC100791.3-201ENST00000617619 330 ntBASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 CAV1-209ENST00000614113 3201 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 DNAL1-201ENST00000311089 2312 ntTSL 2 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 USB1-207ENST00000563149 1751 ntTSL 2 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 LINC00365-201ENST00000413591 2618 ntTSL 3 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 ZNF674-201ENST00000414387 2274 ntAPPRIS ALT2 TSL 3 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 RASGRP4-207ENST00000587738 2293 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 IFT22-211ENST00000621899 2272 ntTSL 2 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 PHC2-203ENST00000373422 2799 ntTSL 2 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 AC004494.1-201ENST00000613210 2775 ntBASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 TUBB8-204ENST00000564130 2438 ntTSL 5 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 ZNF572-201ENST00000319286 3275 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
CDC42SE1Q9NRR8 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 PCBP1-AS1-227ENST00000435880 2386 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms