Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 OR8S1-201ENST00000310194 1080 ntBASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 AL080243.2-201ENST00000418783 582 ntBASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 KRT17P7-201ENST00000451704 1104 ntBASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 MIR6069-201ENST00000620069 79 ntBASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXP3Q9BZS1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 AC067750.1-201ENST00000608826 6545 ntBASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 TPT1P11-201ENST00000458482 498 ntBASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 AC104794.3-201ENST00000566840 1248 ntBASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 INTS4P1-203ENST00000641008 3683 ntBASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXP3Q9BZS1 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
FOXP3Q9BZS1 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.71■□□□□ 0.1
FOXP3Q9BZS1 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
FOXP3Q9BZS1 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.71■□□□□ 0.1
FOXP3Q9BZS1 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms