Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CCL13Q99616 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
CCL13Q99616 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CCL13Q99616 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CCL13Q99616 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CCL13Q99616 AL139094.1-201ENST00000405549 1188 ntBASIC12.74□□□□□ -0.37
CCL13Q99616 BAATP1-201ENST00000412284 1225 ntBASIC12.74□□□□□ -0.37
CCL13Q99616 TMEM14DP-201ENST00000422205 345 ntBASIC12.74□□□□□ -0.37
CCL13Q99616 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.74□□□□□ -0.37
CCL13Q99616 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.74□□□□□ -0.37
CCL13Q99616 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.74□□□□□ -0.37
CCL13Q99616 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 AC068587.3-201ENST00000526613 355 ntBASIC12.74□□□□□ -0.37
CCL13Q99616 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CCL13Q99616 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.74□□□□□ -0.37
CCL13Q99616 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.74□□□□□ -0.37
CCL13Q99616 PRSS30P-206ENST00000641773 873 ntBASIC12.74□□□□□ -0.37
CCL13Q99616 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CCL13Q99616 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.74□□□□□ -0.37
CCL13Q99616 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.74□□□□□ -0.37
CCL13Q99616 ZBED1P1-201ENST00000502364 1930 ntBASIC12.74□□□□□ -0.37
CCL13Q99616 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.74□□□□□ -0.37
CCL13Q99616 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
CCL13Q99616 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CCL13Q99616 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CCL13Q99616 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCL13Q99616 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.73□□□□□ -0.37
CCL13Q99616 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.73□□□□□ -0.37
CCL13Q99616 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
CCL13Q99616 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.73□□□□□ -0.37
CCL13Q99616 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.73□□□□□ -0.37
CCL13Q99616 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.73□□□□□ -0.37
CCL13Q99616 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 KRT8P35-201ENST00000483942 1338 ntBASIC12.73□□□□□ -0.37
CCL13Q99616 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.73□□□□□ -0.37
CCL13Q99616 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
CCL13Q99616 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.73□□□□□ -0.37
CCL13Q99616 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CCL13Q99616 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.73□□□□□ -0.37
CCL13Q99616 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.73□□□□□ -0.37
CCL13Q99616 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.73□□□□□ -0.37
CCL13Q99616 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.73□□□□□ -0.37
CCL13Q99616 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.73□□□□□ -0.37
CCL13Q99616 HLA-K-203ENST00000430151 1046 ntBASIC12.73□□□□□ -0.37
CCL13Q99616 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.73□□□□□ -0.37
CCL13Q99616 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.73□□□□□ -0.37
CCL13Q99616 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 GIMAP3P-201ENST00000495150 836 ntBASIC12.73□□□□□ -0.37
CCL13Q99616 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 CR383656.12-201ENST00000549567 513 ntBASIC12.73□□□□□ -0.37
CCL13Q99616 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.73□□□□□ -0.37
CCL13Q99616 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.73□□□□□ -0.37
CCL13Q99616 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CCL13Q99616 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.73□□□□□ -0.37
CCL13Q99616 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.73□□□□□ -0.37
CCL13Q99616 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL13Q99616 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.73□□□□□ -0.37
CCL13Q99616 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CCL13Q99616 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CCL13Q99616 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.73□□□□□ -0.37
CCL13Q99616 AL035252.4-201ENST00000624174 288 ntBASIC12.73□□□□□ -0.37
CCL13Q99616 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.73□□□□□ -0.37
CCL13Q99616 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms